Gene Dbac_0141 details

Gene Information

• Locus tag: Dbac_0141
• ID: 8375774
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfomicrobium baculatum DSM 4028
• Kingdom: Bacteria
• Replicon accession: NC_013173
• Strand: +
• Start bp: 171256
• End bp: 171789
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 644999369
• Product: Exonuclease RNase T and DNA polymerase III
• Protein accession: YP_003156685
• Protein GI: 256827957
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.000727822
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGTGCT CCCGTGCCTA TGTGGCCATC GATTTTGAAA CGGCTGATTC GTGCCGCGAC 
AGCGCCTGCG CCGTGGGCCT GACCAAGGTC CAGGGCGGCG AGATCGTGGA CCGGCTATAT 
GGCCTGATCC GTCCGCCGCG CTCGCGCTTT TCGCCATTCT GCGTGAACGT GCACGGCATC 
CATTGGTCCG ACGTCAAGGA CGCTCCGGCT TTCCGGGAGT TCTGGATCGA GAATGCGGGC 
TTTCTGGAAG GAGCTGATTT TCTGGCCGCG CACAACGCCA GCTTCGACCG CTCGGTACTT 
GGCGCGTGCT GCACCATGGC CGGGCTGCCC GCGCCATCCC TGCCTTTTGT CTGCACCGTG 
GAACTGGCCC GCAACCAGTG GAATCTGCGG CCCACCAAAT TGCCGGACGT ATGCCGTCAC 
CTGGGCCTTG ACCTCAATCA TCACCACGCC GGGTCGGATG CCGAGGCCTG CGCCCGCATC 
GTCATGGCCG CCGTAGATGA AAACCCCCGC TGTCTGACTC CTTTCGGAAT ATAG 

 

Protein sequence

MTCSRAYVAI DFETADSCRD SACAVGLTKV QGGEIVDRLY GLIRPPRSRF SPFCVNVHGI 
HWSDVKDAPA FREFWIENAG FLEGADFLAA HNASFDRSVL GACCTMAGLP APSLPFVCTV 
ELARNQWNLR PTKLPDVCRH LGLDLNHHHA GSDAEACARI VMAAVDENPR CLTPFGI