| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_0140 |
|---|
| Symbol | |
|---|
| ID | 8375773 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | + |
|---|
| Start bp | 170253 |
|---|
| End bp | 171254 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644999368 |
|---|
| Product | hydrogenase expression/formation protein HypE |
|---|
| Protein accession | YP_003156684 |
|---|
| Protein GI | 256827956 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0309] Hydrogenase maturation factor |
|---|
| TIGRFAM ID | [TIGR02124] hydrogenase expression/formation protein HypE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00214828 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAAAGAG TTCTTCTTGA TTACGGCAGT GGCGGCAAGG CTTCGCATCG GCTCATCGGC
GAGCTTTTTC TCAAATATCT GGGCAACGAG GTTCTCGACC GTCTCGACGA CGCGGCCCTC
CTGCATGTCA GCAGCCCCAT TTCCATGAGC ACCGACACCT TCACCGTGGA CCCCATCTTT
TTTCCCGGCG GCGATATCGG ATCCCTGGCC GTGCACGGAA CGGTCAATGA CGTGGCCATG
CTTGGCGCGC GTCCGAAATA CATGACCTGC GGATTCATCA TCGAAGAAGG CCTGCCCATG
GCCGATCTGG AGCGTATTGT TCAGTCCATG GGAGAGGCCG CCCGCGAAGC CGGCGTGCTG
GTGGTCTCGG GCGATACCAA GGTCGTGCCC AAGGGCACTG TGGACAAGAT TTTCATCAAC
ACCACCGGCA TCGGCGAAAT TTTTGTGGCC GAGGCCCCAA GCGGGCATCG CGCCGCCCCC
GGGGACGCGA TCCTGATCAG CGGCTTCATG GGCGACCATG GCCTCGCCAT CCTGTCCAAG
CGCGAAGGCC TGACCTTCGA GGCCCCCGTG CTTTCGGACT GCGCGTCCCT CAATCATCTT
ATCGTGCGTT TGCTTGAGGC CATCCCTTCC GTGCATGTGC TGCGCGATCC CACTCGGGGC
GGCCTGGCCA CGACCTTGAA CGAAATCGCC GGACAGTCGG GTGTGGAATG CCGGATTTTT
GAATCCAAAA TCCCGGTTCG TCCCGAAGTC AGCGGCGGCT GTTCCTTTCT GGGCCTCGAT
CCCCTGTATC TGGCCAACGA GGGCAAGTTC ATCTGCATCC TGCCCCAGGA GCACGCCGAG
GCGGCCCTGG CCATCATGCG CTCGGACCCG CTTGGCGCGG ACGCGGCGCA GATCGGCGAC
GTGCGCGCAG AGCACCCCGG CAAGGTCGTG CTGGAAACGC CTCTGGGCGG CACCCGGCTC
ATGGACATGC TCGAAGGCGA ACAGTTGCCG CGCATCTGCT GA
|
|---|
| Protein sequence | MERVLLDYGS GGKASHRLIG ELFLKYLGNE VLDRLDDAAL LHVSSPISMS TDTFTVDPIF
FPGGDIGSLA VHGTVNDVAM LGARPKYMTC GFIIEEGLPM ADLERIVQSM GEAAREAGVL
VVSGDTKVVP KGTVDKIFIN TTGIGEIFVA EAPSGHRAAP GDAILISGFM GDHGLAILSK
REGLTFEAPV LSDCASLNHL IVRLLEAIPS VHVLRDPTRG GLATTLNEIA GQSGVECRIF
ESKIPVRPEV SGGCSFLGLD PLYLANEGKF ICILPQEHAE AALAIMRSDP LGADAAQIGD
VRAEHPGKVV LETPLGGTRL MDMLEGEQLP RIC
|
|---|
| |