Gene Dbac_0136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0136 
Symbol 
ID8375769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp167171 
End bp168079 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content65% 
IMG OID644999364 
ProductD-alanine/D-alanine ligase 
Protein accessionYP_003156680 
Protein GI256827952 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes 
TIGRFAM ID[TIGR01205] D-alanine--D-alanine ligase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.444809 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATCC TTTTGATCGC CGGGGGCTGG TCCGGTGAAC GCGAAGTCGC TTTAAGCGGC 
GCCAGACAGA TCGAAAAAGG CCTGCTCACC CTGGGCCACC AGGTCACCCA CTTCGATCCC
GCCCGCGACC TGCGCGGCCT GTACGAGGCG GCAGCGGGCC ATGAATTCGC TTTCATCAAC
CTGCACGGCT CACCCGGCGA AGACGGCCTC GTCCAGTGCC TGCTGGAACG CATCGGTATG
CCGTACCAGG GTTCGGACTC CCGCGCTTCG CTCCTGGCCC TGAACAAGGC CGTTTCCAAG
CAGATTTTCG AGGCCGCCGG CCTGCCCACT CCGGCCTGGG AATTCGTGCC CGCGAGCCAT
GTCGCCGAGT GGCGACCCCT CTTGCCATTT CCTCTGGTGG TCAAGCCGAA TACCGGCGGC
TCCAGCCTTG GCGTCGGCAT CGTCGCGTCC GAGGACGAAC TCGAAGCCTA TCTGGCCCAG
CCTGAAATCG CCGGGCAGGA TCTTTTGGCC GAGGCGCTGA TCCGCGGCCA GGAGCTGACC
TGCGGGGTGC TCGAAGGCTG CGTCCTGCCG CCCATCCTGA TCCGCCCCAA GAGCGGAGAA
TTCTTTGACT ACGAAAGCAA GTACGTGGCC GGAGCCACGG AAGAGATCTG CCCGGCCCCG
ATTCCGGCAG AGTTGACCGA ACGATTGCAG GTCATGGCCC GCGCCGCCCA CGACGCGCTT
GGTCTGTCCG ATTACAGCCG CGCGGATTTC ATGGTCACGG CGGACGGCAT GCCGTACCTG
CTGGAAGTCA ACACCCTGCC CGGCATGACC GCCACCAGCC TCCTGCCGCA GGAGGCCCAG
GCCGTGGGCC TGTCTTTCGA GCAACTCCTG ACCCGGCTCA TCGAGCTCGG GCTACGCAAA
AGACCGTGA
 
Protein sequence
MNILLIAGGW SGEREVALSG ARQIEKGLLT LGHQVTHFDP ARDLRGLYEA AAGHEFAFIN 
LHGSPGEDGL VQCLLERIGM PYQGSDSRAS LLALNKAVSK QIFEAAGLPT PAWEFVPASH
VAEWRPLLPF PLVVKPNTGG SSLGVGIVAS EDELEAYLAQ PEIAGQDLLA EALIRGQELT
CGVLEGCVLP PILIRPKSGE FFDYESKYVA GATEEICPAP IPAELTERLQ VMARAAHDAL
GLSDYSRADF MVTADGMPYL LEVNTLPGMT ATSLLPQEAQ AVGLSFEQLL TRLIELGLRK
RP