Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_0136 |
Symbol | |
ID | 8375769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | - |
Start bp | 167171 |
End bp | 168079 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644999364 |
Product | D-alanine/D-alanine ligase |
Protein accession | YP_003156680 |
Protein GI | 256827952 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.444809 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATCC TTTTGATCGC CGGGGGCTGG TCCGGTGAAC GCGAAGTCGC TTTAAGCGGC GCCAGACAGA TCGAAAAAGG CCTGCTCACC CTGGGCCACC AGGTCACCCA CTTCGATCCC GCCCGCGACC TGCGCGGCCT GTACGAGGCG GCAGCGGGCC ATGAATTCGC TTTCATCAAC CTGCACGGCT CACCCGGCGA AGACGGCCTC GTCCAGTGCC TGCTGGAACG CATCGGTATG CCGTACCAGG GTTCGGACTC CCGCGCTTCG CTCCTGGCCC TGAACAAGGC CGTTTCCAAG CAGATTTTCG AGGCCGCCGG CCTGCCCACT CCGGCCTGGG AATTCGTGCC CGCGAGCCAT GTCGCCGAGT GGCGACCCCT CTTGCCATTT CCTCTGGTGG TCAAGCCGAA TACCGGCGGC TCCAGCCTTG GCGTCGGCAT CGTCGCGTCC GAGGACGAAC TCGAAGCCTA TCTGGCCCAG CCTGAAATCG CCGGGCAGGA TCTTTTGGCC GAGGCGCTGA TCCGCGGCCA GGAGCTGACC TGCGGGGTGC TCGAAGGCTG CGTCCTGCCG CCCATCCTGA TCCGCCCCAA GAGCGGAGAA TTCTTTGACT ACGAAAGCAA GTACGTGGCC GGAGCCACGG AAGAGATCTG CCCGGCCCCG ATTCCGGCAG AGTTGACCGA ACGATTGCAG GTCATGGCCC GCGCCGCCCA CGACGCGCTT GGTCTGTCCG ATTACAGCCG CGCGGATTTC ATGGTCACGG CGGACGGCAT GCCGTACCTG CTGGAAGTCA ACACCCTGCC CGGCATGACC GCCACCAGCC TCCTGCCGCA GGAGGCCCAG GCCGTGGGCC TGTCTTTCGA GCAACTCCTG ACCCGGCTCA TCGAGCTCGG GCTACGCAAA AGACCGTGA
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Protein sequence | MNILLIAGGW SGEREVALSG ARQIEKGLLT LGHQVTHFDP ARDLRGLYEA AAGHEFAFIN LHGSPGEDGL VQCLLERIGM PYQGSDSRAS LLALNKAVSK QIFEAAGLPT PAWEFVPASH VAEWRPLLPF PLVVKPNTGG SSLGVGIVAS EDELEAYLAQ PEIAGQDLLA EALIRGQELT CGVLEGCVLP PILIRPKSGE FFDYESKYVA GATEEICPAP IPAELTERLQ VMARAAHDAL GLSDYSRADF MVTADGMPYL LEVNTLPGMT ATSLLPQEAQ AVGLSFEQLL TRLIELGLRK RP
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