Gene Dbac_0134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0134 
Symbol 
ID8375767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp165179 
End bp165916 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content63% 
IMG OID644999362 
Product3-deoxy-manno-octulosonate cytidylyltransferase 
Protein accessionYP_003156678 
Protein GI256827950 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase 
TIGRFAM ID[TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.686402 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGAGG TCATCGCCAT CATCCCGGCC AGATACGAAA GCTCCCGTTT TCCGGGTAAG 
CCCTTGGCCC TCATCCACGG CAAGCCCATG TTCTGGCACG TCATGCGGCG CGCAGGCCTG
TGCCCGCAGG TGGGCGCCGT GGCCCTGGCC ACGGACGACG AGCGCATCTT CAGCGCCGCC
CGGGACTTCG GGCTCACCGC GCTCATGACC AGCCCAGGTC ACGCCAGCGG CACGGACCGG
GTGCTTGAGG CCGCCCGGCT CCTGGGCGCG GCCCCGGACA GCGTCATCGT CAATGTCCAG
GGCGACGAGC CGGCCTTGAA CCCCGAAATG CTGACCGAAC TGATCCAGCC CTTCGATGAT
CCGCACGTAC ACGTCACCAC TTTGGGGCAC ATCATCAGCG CCAAAGAGGC CGAGTCAGCG
GACCGGGTCA AGATCGTACG CGCGGCAGAT GGCCGGGCGC TCTATTTCTC CCGCGCCAAG
GTCCCCTTCG GACGCGACAA CTCACCGGAA TATATAGGAC ATATCGGCCT TTATGGACTG
CGCATGCACG TCCTTGAAAA ATTCAGCGCT TTGGGCGAGA GTCCCTTGGA GAAACTGGAA
AAACTGGAAC AGCTGCGGCT GCTCGAAGCC GGCATCCCCA TCCATGTGGC CCTCACGCGG
CACAAGAGCC ACGGCGTGGA CCGCCCAGAA GATCTGCCCA CAGTCACAGC ACTCATGCGA
GGAGAACATC ATATATGA
 
Protein sequence
MPEVIAIIPA RYESSRFPGK PLALIHGKPM FWHVMRRAGL CPQVGAVALA TDDERIFSAA 
RDFGLTALMT SPGHASGTDR VLEAARLLGA APDSVIVNVQ GDEPALNPEM LTELIQPFDD
PHVHVTTLGH IISAKEAESA DRVKIVRAAD GRALYFSRAK VPFGRDNSPE YIGHIGLYGL
RMHVLEKFSA LGESPLEKLE KLEQLRLLEA GIPIHVALTR HKSHGVDRPE DLPTVTALMR
GEHHI