Gene Dbac_0116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0116 
Symbol 
ID8375749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp140636 
End bp141307 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content57% 
IMG OID644999345 
ProductUDP-N-acetylglucosamine pyrophosphorylase related protein 
Protein accessionYP_003156661 
Protein GI256827933 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1213] Predicted sugar nucleotidyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.786197 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCAG TCATCCTCGC CGCGGGCGTC GGCAGTCGGC TCGGCAGGCC GTTTCCCAAA 
TGCCTGTCCA TGCTTCCCAC TGGAGAGCGC ATTCTCGGGC GGCAGATCCG GATTTTTCGC
CAGTTCGGGA TCAACGAGAT CTTCGTGGTC GTGGGGTTCA AGAAGAACCT GATCATGGAG
GAGTTTCCCG ACGTCTATTA CCGCTACAAC CCCATCTACT ACATCACCAA CACCTCCAAG
AGCCTGTGCT GCGCACTGGA ATTTCTGGAT GACGACGTCA TCTGGTGCAA TGGAGACGTG
GTCTTCGACG AGGGCGTGAT CCGGGAGATG GCGGCTCATG CGGGCAATGC CGTGGCCGTG
GACCGCAAGA AATGCGGCGA GGAAGAGGTC AAGTACCGGG CAGACCAGAA CGGACTGATC
CTTGAAATTT CAAAAAAGGT CGCCGCGCCC GAGGGTGAAG CCGTGGGCGT GAACCGCATT
CAAAAAAATG ACATCCCGGT CTTCCTGCAG GCTTTGGCCC GGTGCAAGGA ACAGGATTAT
TTCGAAATGG GCGTGGAAAT GCTCATCAAG CAGGGCGTCG ATTTTTCCGC CGTGGATATC
TCCGCCTACC GCTGCATCGA GGTCGATTTC GAGGAAGACT TGAAGCAGGC GCTGAGCATG
TTCGCCGAGT AG
 
Protein sequence
MKAVILAAGV GSRLGRPFPK CLSMLPTGER ILGRQIRIFR QFGINEIFVV VGFKKNLIME 
EFPDVYYRYN PIYYITNTSK SLCCALEFLD DDVIWCNGDV VFDEGVIREM AAHAGNAVAV
DRKKCGEEEV KYRADQNGLI LEISKKVAAP EGEAVGVNRI QKNDIPVFLQ ALARCKEQDY
FEMGVEMLIK QGVDFSAVDI SAYRCIEVDF EEDLKQALSM FAE