Gene Dbac_0106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0106 
Symbol 
ID8375739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp129051 
End bp130532 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content59% 
IMG OID644999335 
Productglycogen/starch synthase, ADP-glucose type 
Protein accessionYP_003156651 
Protein GI256827923 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0297] Glycogen synthase 
TIGRFAM ID[TIGR02095] glycogen/starch synthases, ADP-glucose type 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCACAC CGCCCCACGA TATTGTTTTC CTGACTTCCG AAATCTATCC TTTCTCCAAG 
TCCGGAGGAT TGGCTGACGT CATGGGGATT TTGCCCCTGA CCCTATCCCG CATGGGGGTA
CGGGTGGCCG TGATCACGCC CTTCTACGGC AGGCTGTCCA CGGGACATTA CCCTGTCCAC
CTGGTGCAGG AGAATTGCCC GGTGGGCTAC CCTTGGGCCG ACACCACGGC CGACATCTAC
CTGGCCGATT ATCACGGCCT GCCCGTCTAT TTCATAGAGC GCGGCGAGTA TTTTGATCGC
CGTCAGTACT ATTGCACGCA CAAAGGCGAT TATTTCGACA ACTGCGAGCG GTTCATCTTT
TTCTGCCGTG CAGCCCTTGC CGCCATCCGG CACATGGACA TGGGCGCGCG CATTGTTCAT
GCCCAGGACT GGCACGCAGG CCTGGCCATG GCCTATCTGG CTTTCTGGCG GCGTATCGAT
CCTTTCTGGG CGGGTGTGCG CACGGTCATG TCCATCCACA ATCTGGCGTA TCAGGGGCGT
TTTTCCTACC GGCTCTTCGA GCAATCAGGG CTGCCCCTCG ATGCCTGGAA CATGGAAGGC
GTGGAGTTCT ACAACAGCTT CAACCTGCTC AAGGCCGGCA TCGCCTATGC CGACAAGATC
ACCACGGTCA GCCCCAGCTA TGCCGCCGAG ATCATGACCC CGGAGTTCGG GTGCGGCCTG
GAGGGCATCC TGACCCGCCG TAAGGCCGAC CTGATCGGGA TTTTGAACGG CGCGGACTAT
TCCATCTGGA GCCCGGAAAA CGACGAGGTC CTGGAGTGCA CCTATTCGGC GGACAAGCCT
GAAGGCAAGG AGAATTGCAA GAAGCATCTC ATGGGCATGC TCGGGTTGTC GCCGGATTTG
GCCGAGCGCC CGCTTTTGGG CTTCATCGGA CGCCTGCGTG GCCAGAAGGG CATCGACATT
GTGCTTGAGA TCATCCCCGA ACTCATGAAG CTCGATGTGG GGCTGGTGGT TCTGGGCGAG
GGCCGCGCCG AGTTCGAGGC CATGCTCATG AGCATCATGG AAGACTATCC GGGCAGGATC
GTGGGGATCA TCGGCTATAC GGAGGAGATG TCGCATCTCA TTCAGGCCGG GGCGGATATT
TTTCTCATGC CGTCACGTTA CGAGCCGTGC GGCCTGACGC AGATGTACAG CCTGAGCTAC
GGCACTCCGC CCGTGGCCAC CGCGGTGGGC GGCCTGCGGG ACACCATCAC CCCCTATCCC
GGTTCCGGCG CCAATGGTTT CATTTTCGCC GACCCCACGC CGGAGGCGCT TTTGGCCACG
GTGCGCAAGG CGGTGCAGGT CTGGGAAGAT CGCAATGCCT GGAGAGAAGT TCAGGTCAGC
GCCATGCAAA CACGTTTTTC TTGGGAAAAC TCCGCGCGCA AGTATATGGA TGTCTACACA
TCCCTGCACG GAGATCTTTT AGACACATGG AGGATACTAT GA
 
Protein sequence
MITPPHDIVF LTSEIYPFSK SGGLADVMGI LPLTLSRMGV RVAVITPFYG RLSTGHYPVH 
LVQENCPVGY PWADTTADIY LADYHGLPVY FIERGEYFDR RQYYCTHKGD YFDNCERFIF
FCRAALAAIR HMDMGARIVH AQDWHAGLAM AYLAFWRRID PFWAGVRTVM SIHNLAYQGR
FSYRLFEQSG LPLDAWNMEG VEFYNSFNLL KAGIAYADKI TTVSPSYAAE IMTPEFGCGL
EGILTRRKAD LIGILNGADY SIWSPENDEV LECTYSADKP EGKENCKKHL MGMLGLSPDL
AERPLLGFIG RLRGQKGIDI VLEIIPELMK LDVGLVVLGE GRAEFEAMLM SIMEDYPGRI
VGIIGYTEEM SHLIQAGADI FLMPSRYEPC GLTQMYSLSY GTPPVATAVG GLRDTITPYP
GSGANGFIFA DPTPEALLAT VRKAVQVWED RNAWREVQVS AMQTRFSWEN SARKYMDVYT
SLHGDLLDTW RIL