Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_0083 |
Symbol | fumC |
ID | 8375716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | + |
Start bp | 101982 |
End bp | 103382 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644999313 |
Product | fumarate hydratase |
Protein accession | YP_003156629 |
Protein GI | 256827901 |
COG category | [C] Energy production and conversion |
COG ID | [COG0114] Fumarase |
TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGAAAA CGCGTATCGA GACCGACAGC ATGGGGCCCG TCGAGGTGCC GCAGGATCGC TACTGGGGAG CGCAGACCCA GCGCTCTCTG AAATACTTCC GCATAGGCGG CGACCTCATG CCCCCGGAGA TCATCCATGC CTTCGGCATT TTGAAACTCG CGTCGGCGCA GGCCAATCTG GAATTAGGCA AGCTGTCCCC CCACGTGGCC GAGCCCATCA TGGCGGCCTG CCGGGAAGTC ATGGACGGAA AGCTGGCCGG GCATTTTCCC CTCCATGTCT GGCAGACGGG CAGCGGCACC CAGACCAACA TGAACGTGAA CGAGGTCGTG GCCAACCGGG CAATCGAGCT GCTTGGCGGG GCGCTCGGCA GCAAGACGCC CGTGCATCCC AATGATCACG TCAACATGTC CCAGTCCTCC AACGACACCT TTCCGGCGGC CATGCACATT GCGGCCGTGC TCATGCTCAC GGGCACATTG ATCCCGGCCG TGACGGCCAT GCATGCCGAG CTTGCACGCA AGGCCAGGGA GTGGAACGGC ATCGTCAAGA TCGGCCGCAC CCATCTGCAG GACGCCGTGC CCATGACCCT GGGTCAGGAG TTTTCGGGAT ACGCGGCCCT GCTGGAGGAT AATCTGGAGC GGCTGCGGGG CTGCCTGCCG CATCTGTGCC GACTGGCGCT GGGCGGGACG GCGGTGGGCA CGGGACTGGG CACTCCCCCG GATTTCGCCG AGCTGGCCAC GAGTCGGATC GCCGCACTGA CGGGGCTGGC GTTCGTGCCG GCCCCGAATT TCTTCGCCGC CCTTTCAGCC CATGACGCCG TGGTCATGGC TTCGGGAGCC CTCAAAACTC TGGCCGCCTC GCTCATGAAG ATCGCCAACG ACATCCGCTG GCTGGCCTCG GGTCCGCGCG CGGGGCTCGG CGAGCTTATC CTGCCCGCCA ACGAACCCGG TTCGTCCATC ATGCCCGGCA AGGTCAACCC GACCCAGTCC GAGGCCATGA CCATGGTCTG CGTGCAGGTC ATGGGCCTGG ACGCGGCCAT CGTGTTCGCC GGTTCCCAGG GTAATTTCGA GCTGAACGTC TTCAAGCCCG TCATGATCTT CAATCTGCTG ACGGGCATGC GTCTTTTGGC CGATGCCTGC GCAAGCTTCA CGGTCCACGC GCTGACGGGC CTTACGCCCG ACGTGAACGT CATCGCCCGG CATGTGGGGA ATTCGCTCAT GCTGGTCACG GCCCTCTCGC CGGTCATCGG CTACGACAAG GCCGCCGAGG TGGCGCACAA GGCGCACGCC GAGGGCACAA GCCTGAAAGA GGCCTGCCTT GAACTCGGCT ATCTGGACGG GGAGACGTTT GACGGATTGG TCCGGCCGCT TCGGATGGCC AGGCCGCATG AGGCCGGGTG A
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Protein sequence | MTKTRIETDS MGPVEVPQDR YWGAQTQRSL KYFRIGGDLM PPEIIHAFGI LKLASAQANL ELGKLSPHVA EPIMAACREV MDGKLAGHFP LHVWQTGSGT QTNMNVNEVV ANRAIELLGG ALGSKTPVHP NDHVNMSQSS NDTFPAAMHI AAVLMLTGTL IPAVTAMHAE LARKAREWNG IVKIGRTHLQ DAVPMTLGQE FSGYAALLED NLERLRGCLP HLCRLALGGT AVGTGLGTPP DFAELATSRI AALTGLAFVP APNFFAALSA HDAVVMASGA LKTLAASLMK IANDIRWLAS GPRAGLGELI LPANEPGSSI MPGKVNPTQS EAMTMVCVQV MGLDAAIVFA GSQGNFELNV FKPVMIFNLL TGMRLLADAC ASFTVHALTG LTPDVNVIAR HVGNSLMLVT ALSPVIGYDK AAEVAHKAHA EGTSLKEACL ELGYLDGETF DGLVRPLRMA RPHEAG
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