Gene Dbac_0081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0081 
Symbol 
ID8375714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp100489 
End bp101295 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content62% 
IMG OID644999311 
Productmonofunctional biosynthetic peptidoglycan transglycosylase 
Protein accessionYP_003156627 
Protein GI256827899 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID[TIGR02070] monofunctional biosynthetic peptidoglycan transglycosylase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGGGC ACGCCGCCCT CTATGCAACA TCTACTAGCT CCAACATGGC ACGCAAGACA 
ACCACTTCCA GCCCCCGGCG CAACCAGCAC CGCCCTGCCG CGAAAAAGCA CGCCGCATCA
AAGGGCCTGC TTCGCCGTGC CCTGCGCGCG GCCGGCTGGA TTCTGCCGGG AATAGTGGCC
GTCATCCTGC TCCTGCGCTT CGTGCCGCCG CCCACCAGCG CCTTCATCCT CACCCGCCAT
GTGGAGCGGA TGCTCGATTC AGCTCCCGGC CCTGCCGTTA TGCATGAATG GACGCCCCTG
CGACGCATCC CGAGGCACAT GGCGCTGGCC GTGGTGGCGG CGGAGGATCA GAACTTCCCG
AACCATTTCG GCTTCGACGT CGATGCCATC GCGCGGGCGG TGGAGCATAA CAAAAAGAAT
CAAAGAGTCC GGGGGGCTAG CACCATCTCT CAGCAAACGG CCAAGAATCT TTTTCTGTGG
TCCGGGCGCA GCTATGTGCG CAAGGCCCTG GAAGCCGGAT TCACGGTGCT GATCGAGCTT
CTTTGGTCCA AGGAAAGGAT TTTGGAAGTC TACCTGAATA TTGCCGAATT CGGTGACGGC
ACGTACGGTG TCGGGGCGGC CTCCAAACGA TTCTTCGGCA AGACGCCCGC CAGACTGACC
ACGCACGAGG CGGCCCTGCT GGCCGCTGCG CTCCCGAGCC CCAGAAAATT TTCGCCATCC
CGTCCGTCCG CCTATCTGCG GCAAAGAGCG CAGTGGGTGC AGACCCAAAT GAGGCAACTG
GGACCAAACC ACATCGCGTG GCACTGA
 
Protein sequence
MAGHAALYAT STSSNMARKT TTSSPRRNQH RPAAKKHAAS KGLLRRALRA AGWILPGIVA 
VILLLRFVPP PTSAFILTRH VERMLDSAPG PAVMHEWTPL RRIPRHMALA VVAAEDQNFP
NHFGFDVDAI ARAVEHNKKN QRVRGASTIS QQTAKNLFLW SGRSYVRKAL EAGFTVLIEL
LWSKERILEV YLNIAEFGDG TYGVGAASKR FFGKTPARLT THEAALLAAA LPSPRKFSPS
RPSAYLRQRA QWVQTQMRQL GPNHIAWH