Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_0062 |
Symbol | |
ID | 8375695 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | - |
Start bp | 85228 |
End bp | 86352 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644999292 |
Product | riboflavin biosynthesis protein RibD |
Protein accession | YP_003156608 |
Protein GI | 256827880 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0117] Pyrimidine deaminase |
TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain [TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATGAGG ACTGCGCGTT CATGGATCAG GCCATCCGCC TGGCCGAGCA AGGCCGGGGG CGCACCGCGC CCAACCCTTG CGTCGGCGCG GTTCTGACGC GCGGCGGCGA GGTCGTGGCC GAGGGCTGGC ATACGGCCTG CGGACAGCCT CACGCCGAAG TCGAAGCCCT GCGCGATGCG CAGGCCAAGG GTGTCGATCC TCGCGGGTGC ACTCTCTACG TCACCCTTGA GCCCTGCAAC CACCAGGGCA AGACGCCGCC CTGCACCAGG GCCATCCTGG AGGCGGGGGT ACCGGAGGTG GTCGTGGGCT GTGCCGATCC CAACCCCACG GTCGCCGGAG GCGGCGCCGA CTTTCTGCGC GGCCGGGGCG TTACGGTGCG CATGGGCGTG CGCGAACAGG AATGCCGCGA CCTGATCGCC GATTTTCTGG TCTGGCAGAC CACGGCCCGC CCGTATTCCA TCCTCAAGCT GGCCACCACC CTGGACGGCA AGATCGCCAC CCGCGACGGC CAGGCGGCCT GGATCTCGGG CGAAGCTTCG CGCCGCGAAG TGCACAGGCT GCGAACCTGG TGCCAGGCGG TCATTGTCGG CGGGGGCACT TTCCGCGCCG ACAACCCGAG CCTGACCTGC CGGCTGCCCG GATACGACGG CCCGCAGCCG CTGGCCGTGA TCGTGTCCCG TTCTCTTCCG GATCCGGCCC AGGACTCGAA TCTTCTGTCC ACCCGGCCGG ACCAGATCAT TTTCTGGACA ACCGAGGCGC AAAGCCGTTC CATTCGCGCC ACGCGCCTGA CGGAACTGGG CGTGACGGTC TGGGGCCTGC CTTGCTTGAA GACGCCTGCC GAAACCCTTG ACCTGAACGC GGGGCTGCAG CTGCTGCGCA AGGACCGCGG ATGCCACTAC ACCCTGACCG AGGGCGGCGG GCATCTGGCC GGATCCATGC AGAGGCAGGG ACTGGTCGAC GAACTGCGCA TATTCCAGGC CATGAAGGTC CTGGGCGATG AAGAGGCCAG GTCGGCCTTT GCCGGCCGCA AGGCCCTGTC CATGCAGGAC TGCTGGGAAT TTCGGCTCGT CGAGCAGGGA TTTTTCGAAA CCGATCTCTA TCTGCGGCTA CGAGCAAAGG AGTAG
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Protein sequence | MHEDCAFMDQ AIRLAEQGRG RTAPNPCVGA VLTRGGEVVA EGWHTACGQP HAEVEALRDA QAKGVDPRGC TLYVTLEPCN HQGKTPPCTR AILEAGVPEV VVGCADPNPT VAGGGADFLR GRGVTVRMGV REQECRDLIA DFLVWQTTAR PYSILKLATT LDGKIATRDG QAAWISGEAS RREVHRLRTW CQAVIVGGGT FRADNPSLTC RLPGYDGPQP LAVIVSRSLP DPAQDSNLLS TRPDQIIFWT TEAQSRSIRA TRLTELGVTV WGLPCLKTPA ETLDLNAGLQ LLRKDRGCHY TLTEGGGHLA GSMQRQGLVD ELRIFQAMKV LGDEEARSAF AGRKALSMQD CWEFRLVEQG FFETDLYLRL RAKE
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