Gene Dbac_0060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0060 
Symbol 
ID8375693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand- 
Start bp83315 
End bp84529 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content62% 
IMG OID644999290 
Product3,4-dihydroxy-2-butanone 4-phosphate synthase 
Protein accessionYP_003156606 
Protein GI256827878 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase 
TIGRFAM ID[TIGR00505] GTP cyclohydrolase II
[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.194891 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACAAAT GTTCGGCCGA AGAGGCCATC AAGGAAATAA AGGCCGGGAA GATGATCATC 
CTGGTCGATG ACGAGGACCG GGAAAATGAA GGCGATCTGA CCATCGCCGC CGAAATGGTC 
ACTCCCGAGG CCATCAATTT CATGGCCAAA TACGGCCGCG GCCTCATTTG CCTCGCATTG 
GAACCGGCCC TGGTCGACAA GCTGGAACTG CCGCTCATGG CCCGGCGCAA CACCTCCAAG 
TTCGGAACCA ACTTCACCGT GTCCATCGAA GCCAAGCAGG GCGTGACCAC AGGCATCTCC 
GCCCACGACC GCGCCCTGAC CATCCAGACC GCCGTGGCCG ACCAGACCAC CCCCGAAGAC 
CTGGCCACCC CCGGGCATAT CTTTCCCCTG CGCGCCAAGC CCGGCGGGGT CCTGGTCCGC 
GCCGGACAGA CCGAGGGCTC CGTGGACCTG GCCCGCCTGG CCGGGCTCAA GGGCGCAGCC 
GTCATCTGCG AGATCATGAA CGATGACGGC AGCATGTCGC GCATGCCCGA CCTTCGAAAG 
TTCGCCGAAG AGCACGACAT GAAGATCGCC ACCATCGCCG ATCTCATCGC CTACCGCTCC 
CGCAAGGACT CCCTGGTCCG CCGCGTGGCC GAGGCGCGCA TGCCCACCTG CTACGGCGAG 
TTCACCATCG TGGCCTACGA GAACGACATC GACAGCCACA CCCACATCGC CCTGGTCAAA 
GGCGAGATCA ACGAAGAGAC CCCCGTGCTG GTGCGCGTGC ACAGCGAATG CCTGACCGGA 
GACGTATTCG GCTCCATGCG CTGCGACTGC GGCAGCCAGT TGCAGCGGGC CATGCAGATG 
GTCAACGACG AGGGCGCGGG CGTCATCCTC TACATGCGCC AGGAAGGCCG CGGCATTGGC 
CTTGGCAACA AGATCAAGGC CTACCACCTG CAGGACGAAG GCCGCGACAC CGTGGAAGCC 
AATCTGGAAC TGGGCTTCGC CCCCGACCTG CGCGATTACG GCCTCGGGGC GCAGATCCTG 
GTCGACCTGG GCGTGAAGCG CATGCGCCTT TTGACCAACA ACCCCAAGAA GATCATTGGC 
CTCGAAGGCT ACGGCCTCAA AGTCGAGGAG CGGATATCCA TCGAAATCCC GGCCTGTGAC 
GACAACAAGT GCTATCTGCA CACCAAGCAT TCAAAACTCG GCCATCTGTT GCAATTCGAA 
GCCGAAAACA AATAA
 
Protein sequence
MHKCSAEEAI KEIKAGKMII LVDDEDRENE GDLTIAAEMV TPEAINFMAK YGRGLICLAL 
EPALVDKLEL PLMARRNTSK FGTNFTVSIE AKQGVTTGIS AHDRALTIQT AVADQTTPED 
LATPGHIFPL RAKPGGVLVR AGQTEGSVDL ARLAGLKGAA VICEIMNDDG SMSRMPDLRK 
FAEEHDMKIA TIADLIAYRS RKDSLVRRVA EARMPTCYGE FTIVAYENDI DSHTHIALVK 
GEINEETPVL VRVHSECLTG DVFGSMRCDC GSQLQRAMQM VNDEGAGVIL YMRQEGRGIG 
LGNKIKAYHL QDEGRDTVEA NLELGFAPDL RDYGLGAQIL VDLGVKRMRL LTNNPKKIIG 
LEGYGLKVEE RISIEIPACD DNKCYLHTKH SKLGHLLQFE AENK