Gene Dbac_0057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0057 
Symbol 
ID8375690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp79853 
End bp82342 
Gene Length2490 bp 
Protein Length829 aa 
Translation table11 
GC content61% 
IMG OID644999287 
Productleucyl-tRNA synthetase 
Protein accessionYP_003156603 
Protein GI256827875 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0495] Leucyl-tRNA synthetase 
TIGRFAM ID[TIGR00396] leucyl-tRNA synthetase, eubacterial and mitochondrial family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.300018 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGCATT ACGATTTCAA GCAGATCGAG GAAAAATGGC AGCAGGCCTG GGAAGAGAAG 
GCCTGTTTTC GGACCGACAT GTCCCGGGAC GGCGAAAAAT ACTATGTCCT GGAAATGTTC
CCCTATCCGT CGGGACGCAT CCACATGGGA CATGTGCGCA ACTACTCCAT CGGTGACGTG
GTCGCCCGCT ACAAGCGCAT GCAGGGCTTC AACGTCTTCC ATCCCATGGG CTGGGACGCC
TTCGGCCTGC CCGCCGAGAA CGCGGCCATC AAGAACAACA CCCACCCCGC CAAGTGGACC
TACGAAAACA TCGCCTACAT GCGCGCCCAG CTGAAACGTT TGGGCTACTC CTATGACTGG
GACCGGGAAA TCGCGACCTG CCACCCGGGA TACTACCGTT TCGAGCAGGA ATTCTTTCTC
AAATTTCTGG AAAAAGGACT GGTTTATCGC AAGAACGCGC CGGTCAACTG GTGCCCGAGC
TGCCACACCG TGCTGGCCAA CGAGCAGGTC GAGGAAGGGC TGTGCTGGCG CTGCGACTCC
GAGGTGCAGC AGAAGCAGCT CTCACAGTGG TTCCTGCGCA TCACCGACTA TGCCGAGGAG
CTTCTGGCGG ATCTGGACAA GCTGACCGAC GGCTGGCCCG AACGGGTGCT GACCATGCAG
CGCAACTGGA TCGGCAAAAG CATCGGTGCC GAGATCTCCT TCAAGGTCAA AGATCTGGAC
GAAGCGATCC CCGTGTTCAC GACCCGGCCC GACACGCTCT TCGGCGCGAC GTTCATGAGC
CTGGCTCCGG AACATCCTCT GGTGGAGAAG CTTGTCGCCG GAACCGCCCA GGAAGCCGCG
GTAGGCGAAT TCGTGGACCG CATCGCCAAA ATGGACCGCA TCGTCCGCAC CGCCGATGAC
CTGGAAAAGG AAGGCGTCTT CACCGGACAG TACTGCATAA ATCCCCTTAC GGGCCGCGAA
ATGCCCATCT ATGTGGCCAA TTTCGTGCTC ATGGGCTACG GCACGGGCGC GGTCATGGCG
GTACCGGCCC ACGATCAGCG CGATTTTGAA TTTGCGGCCA AGTACGACCT GCCCAAACAG
ATTGTCATCA TGCCCCGGGA GGGCGCCCTT GACCTTGCGA CCATGACCGA GGCCTTCACC
GACCCCGGCG TCATGGCCAA CTCAGGCGAG TTCGACGGCA TGGACAGCGA GGCCGCCAAG
AAGGCCATCA TCGACCATCT CGCCGCAGGC GGTCTGGGCA AGCCCACGGT CAACTACAGG
CTGCGCGACT GGAATATTTC ACGCCAGCGC TACTGGGGCG CGCCCATCCC GGTCATCTAT
TGCGACGACT GCGGCATCGT GCCCGTGCCC GCCAGCCAGC TCCCGGTGGA GCTGCCCCTG
GACGTCAAGG TCAACGCCGA CGGACGCTCG CCCCTGCCCG GGTGCGAAAG CTTCGTGAAC
GTACCCTGCC CGACCTGCGG CAAGCCCGCC CGGCGCGAGA CGGACACCAT GGACACATTC
GTCGAGTCAT CCTGGTATTT CGCCCGCTAC ACCTCCGCCC GCAACGAGAC CACGGCTTTC
GACCCGGCCG AGGTCGCCTA CTGGATGCCC GTGGACCAGT ACATCGGAGG TATCGAGCAT
GCCATCCTGC ACCTTTTGTA TTCGCGCTTT TTCGTCAAGG CTCTGCGCGA CGAGGGCTAC
CTCACCCATG ACGAACCCTT CAAGAACCTG CTGACCCAGG GCATGGTCCT GCTGCATGGT
TCCAAGATGT CCAAGTCCAA GGGCAACGTG GTCGATCCCG ACGAGATGAT CGCCAAGTAC
GGAGCGGACA CGGTCCGCCT GTTCTGTCTT TTCGCCGCTC CGCCGGAAAA AGATCTGGAA
TGGAACGACA AGGGCATCGA AGGCGCGAGC CGCTTTCTGA ACCGTCTCTG GCGTCTGGTG
GACGAGCTCG ATGACGTCCT CTCCCCTGTC GGCACGTGCG TAAGCGTGGA GGGAACGCTC
GGCGAGAGCG AAGCTGAACT GCGCCGCAAG GAGCACGATA CCGTGCGCCG GGTGGAGCGC
GACATCGAAA ACAAATTCCA GTTCAACACG GCCATTGCCG CCATGATGGA GCTGGTCAAC
TCCCTCTACG CGACCAAGGA CGACCTGCGC GCAAGCAAAA ACGGCCCGCG CCTCTTGTCA
TCGGCCATCT CCTCCCTCCT GGTGACTCTG TCGCCCATCG CTCCGCACGT CTGCGAAGAG
GTCTGGGACC GCATGGGATA CACCCGCACC CTGGCCGCCG AGCCATGGCC TGCCCACGAC
CCGGAAGCCC TCAGAACGAG CGAGGTGACC GTGGTTCTGC AGGTCAACGG CAAGCTTCGC
AGCCAGATCA CCGTGGCGGC GGATGCGACC TCGGAAGAGA TAGAGACTCA GGCCATGAAC
GATCAAAACG TCTCACGACA CATCGAGGGC AAAACAATTG TCAAAACAAT CGTCATTCCC
GGAAAACTGG TCAACGTGGT TGTCAGGTAA
 
Protein sequence
MRHYDFKQIE EKWQQAWEEK ACFRTDMSRD GEKYYVLEMF PYPSGRIHMG HVRNYSIGDV 
VARYKRMQGF NVFHPMGWDA FGLPAENAAI KNNTHPAKWT YENIAYMRAQ LKRLGYSYDW
DREIATCHPG YYRFEQEFFL KFLEKGLVYR KNAPVNWCPS CHTVLANEQV EEGLCWRCDS
EVQQKQLSQW FLRITDYAEE LLADLDKLTD GWPERVLTMQ RNWIGKSIGA EISFKVKDLD
EAIPVFTTRP DTLFGATFMS LAPEHPLVEK LVAGTAQEAA VGEFVDRIAK MDRIVRTADD
LEKEGVFTGQ YCINPLTGRE MPIYVANFVL MGYGTGAVMA VPAHDQRDFE FAAKYDLPKQ
IVIMPREGAL DLATMTEAFT DPGVMANSGE FDGMDSEAAK KAIIDHLAAG GLGKPTVNYR
LRDWNISRQR YWGAPIPVIY CDDCGIVPVP ASQLPVELPL DVKVNADGRS PLPGCESFVN
VPCPTCGKPA RRETDTMDTF VESSWYFARY TSARNETTAF DPAEVAYWMP VDQYIGGIEH
AILHLLYSRF FVKALRDEGY LTHDEPFKNL LTQGMVLLHG SKMSKSKGNV VDPDEMIAKY
GADTVRLFCL FAAPPEKDLE WNDKGIEGAS RFLNRLWRLV DELDDVLSPV GTCVSVEGTL
GESEAELRRK EHDTVRRVER DIENKFQFNT AIAAMMELVN SLYATKDDLR ASKNGPRLLS
SAISSLLVTL SPIAPHVCEE VWDRMGYTRT LAAEPWPAHD PEALRTSEVT VVLQVNGKLR
SQITVAADAT SEEIETQAMN DQNVSRHIEG KTIVKTIVIP GKLVNVVVR