Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_0022 |
Symbol | |
ID | 8375653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | - |
Start bp | 35668 |
End bp | 39738 |
Gene Length | 4071 bp |
Protein Length | 1356 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644999250 |
Product | GAF sensor hybrid histidine kinase |
Protein accession | YP_003156568 |
Protein GI | 256827840 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTTCG ACAACATCCG GATGAAGCCC AAGCTCCTGT TCCTGTTCAT CATGACCGGA ATAGTTCCTC TGGGCATCGT GGCCCTCATC GGCAGCTATT CCGCGTCCAA CGCCCTCCTC GATCTGGCCT TTGAACAACT CGGCAGCATC CAGGCCATCA AGCGCGACAA ATTGCAGACC ACTCTGACCG AACGCATAAA CGGACTCAAA CTCATGGCCG GGCTGAGGCA GACCCAGCAG GCAGTGGACG ACCTGAACGC GCTCGGCGAG GAAGACCCGG CCCAACCCTA CCCCATCGAA TCCAGTGCCT ATCAAAGAAT CCACGGCAGA TACGATTCCC AGCTCAAGGG CTACATCGCC GTCAACGGCT TTGAAGACAT CTATCTGATC GACCGCCACA GCGGCACCGT CATGTACGCC GCCGGCCAGG GCGAGGAGCT TGGCACCAGC CTGGCCACCG GGCGCTACCG CCATACGGCC CTGGCCAGGC TTTGGGAGAG GGTCCTGCGC AGTGGAAACG TGGCCTTCGA GGATTTCAGC GCCTACGAGC CAAGCGGGGG AAGTCAGGCC GCCTTCATCG GCTATCCGGT CCTCGACCTG CAGGGCGGCG TGGCCGGAGT CATCGCCGCG CGCGTTTCGG GCGAGTTCAT CAACCAGATC ATGCCCTCGC GGCAGGGCCT GGGCAAGTCA GGCGAATCCT ATCTGCTGCG CTGGCTCGAA TCCCAAAAAA AGTTTGAGAT GCGCAGTGAT ATCCAGACGA TGGGCAATGG CCTCTACGTC ATCGGCTACA CCCTGCCTCG CACGCCGGCA TACTGGCATG ACGCCGTGGA CAAGGGGTTT GACGGAGGAG GCGGCACCTA CGAAGACAGC GCGGGCACTA CGGTGCTGGT GGCCTTCAAT ACGCTGGACG TGCTGGGCAC CAACTGGATT CTCATCTCCA AGATCAACAA GGGCGAAATT CTGCGCCCCA TCTGGACGTT CCTGCTGATC ATCTGCGTCA CCGGCGCGGT GCTGGCCCTC ATGATCGCGC CCGGCGCCTA CGGCCTGGCC AAGGGCATCA GCCAGCCTTT GGAACAGGGC GTGAACTTCG CCGAGGCCAT CTCCGCCGGA GACTTGAAGG CCCGTCTGGA TCTGCGCCAA AAGGACGAAC TGGGCATGCT GGCCAAAGCC CTGAACAGCA TGGCCCGCAA CCTGCGCGAC ATGGACTGGC TCAACCAAGG CAAAACAGGC CTCGACGACA CCCTGCGCGG TGAACACAGC CCGCAGGAAC TGGCCCGGCT CTTCATCTCA TTTCTGTGCA AGCATCTGGA CAGCCAAATC GGGCTCTTTT TCCTGCATGA TGACGGCGAA CTGGTGCTGA CCTCTTCCTA TGCCTTCACC AACCGGCAAG GCCAGTTCTC CCGGCTGCGC GTAGGCGAAG GGCTGGTCGG CCAAGCTGCG CTGGAAGGGG AAATTTTGAC CTTCGCCCGG GTCGAAGACG GGGCGCCGCC TTTTCATTTC GGCCCCGGCG AAATCGTCCC CGCCCATTTT CTGGCCGCGC CCGTGTTCAT GGGCAAGGAA TTGCTCGGCG CATTCCTCGT CGGCCGCGAG TACGCATTTT CGCCCCTGCA CAGGCAGTTC ATCACCGACA TCGCCAAGAA CACGGCAGTT CTCTTCAACA TGGCCACCTC GCGGGGCATG ATCGCGGACC TGTTGCGGCA GGCGCAGGAA CAGCAGGAGA TGCTGCGCGT GGCCAACGAG GAGCTCGAAG AACAGACCAA CATGCTTAAA GAGTCCCAGA GCGAGCTGCA GGCCCAGCAG GAAGAGCTGC AGGTCACCAA CGAGGAACTG GCCGAGCAGA CCCGCGCCCT CAAGGAATCC GAGCGGCGGA TGCAGGATCA GCAAAACGAG TTGCGCTCCG TGAACGACAA GCTGGGCGAA CGGGCCATGG AACTCGAAGA ACAGAAGAGC GCCATCCGCC GCAAGAACAA GGAGCTGCTG CGCGCCCAGG AGCAACTCAA GCTCAAGGCC CAGGAACTGG AGAGCGCGAG CAGATACAAA TCCGAATTCC TGGCCAACAT GTCCCACGAG CTGCGCACCC CGCTCAACTC CATCCTCATC CTGTCCCAGC TGCTGTCGCA CAACAAGGAA GGCAACCTTT CCCCGAAACA GACGGAAGCG GCCTCGGCCA TCAACTCTTC GGGCGCGGAC CTGTTGCGCC TCATCAACGA GATTCTCGAC CTGTCCAAGG TCGAGGCGGG CAAGGTCGAA CTTCATCTGG AGGAAATGCC GCTGACATCC ATGATTTCGG ACCTGCAAAG GGTCTTCAAA GGTGTCGCGG TGGAAAAAGG CGTTGCTTTT CTCGTCGAAC AGGATCCGGC CCTGCCCGAA ACCATGCTCA CGGATACGCA CCGGCTGCAG CAAGTCCTGC GCAACCTCCT GTCGAATGCC TTCAAGTTCA CGGACCACGG CAGCGTAACC CTGTCCATCT CCCGCCCCGG ACCGGAAGTC GATCTGCCCG AAGGCATCCC CTCGGCCGAA GAGGCGATCT GCATCGCGGT CACGGACATG GGCATCGGTA TCCCGGAGGA CAAGCAGGGC ACTATCTTTG AGGCCTTCCG TCAGGCCGAC GGAAGCACCA GCCGCAAATA CGGCGGGACG GGCCTCGGGC TATCCATTTC CCGGGAACTG ACCAAGCTTC TCGGCGGAGA AATCCGCCTG CGTAGTCAGG AGGGCAAAGG CTCGACCTTC AGCCTGATCC TGCCTTTACG CCACCACGCC GACGCGCCCA CGGACGAAAT CCGTCCCCGG GTGTCCGCCC CCGAGCCAAA AATGACGCCC CACCAGCCTG CAAAGACGCA AGCCGAGGCG CCCATTTCCT ATCTGCAGGA CGATCGCGCC AATCTGAAGC CCGGCGACAA ATCGCTCCTC ATCATCGAGG ACGACCAGCA TTTTGCCCGC ATCCTGAGAG ACCAGGCGCG GGAGATGGGA TTTAAAGCCC TGCTGGCGGC CGACGGCGAA ACCGGCCTGC ACTTTGCCGA CTTTCATGGT CCGAGCGCCA TCATCCTCGA CAACATCCTG CCGGGCATGA ATGGCTGGAC AGTGATGGAA CGGCTTAAAA ACGATCCCAA GACGCGGCAC ATCCCCCTGT CCTTCATCTC CGCGGAGGAT CGCAGCCTGG AAGCCATGCG CATGGGCGCG CTGGCCTTCC TGACCAAGCC CGTAGAACTG GAAACGCTGC GCACGCTGCT CGAAAGGATT GACTCGTTCA TCAAGAAGCC CATGCGCAGG CTGCTCGTGG TCGATGACGA TGCCTTGCAG CGGGAGTCCA TCCGCGCACT GATCGGCAAT GGCGACGTGG AGACCGTGAC CGCGGCGTCA GGCGCGGAAG CTTTGGGACT GCTCAAATCC CAGAACTTCG ATTGCATGAT CCTGGACCTC GGGCTTAACG ACATGTCCGG CTTTGACGTG CTGCGGACAC TGCGCTCCGG GCCGACGCCG TCCACCCTCC CCGTGGTCGT CTACACCGGC CGGGACCTCA GTGAAGAGGA GGAGCGCAGG CTCTCGCGGT ACGCAGAAAG CATCATCGTC AAGGGGGCGC GCTCCCCCGA GCGTTTGCTG GAAGAAACAA CGCTCTTCCT GCACCGCGTC CAGGCCAATC TGCCCCAGGA AAAGCAGCGC ATGCTCCGGA CGGATACGGA GCCCGAATCC GTGCTCGACG GCCGCACAGT GCTCGTGGTC GATGACGACA TGCGCAATAT TTTTGCGCTG ACGAGCGTTC TCGAAGAAAA AGGGATGCAG GTCGTGGTCG CCAGGGACGG CAGCGAAAGC CTGACCAGGC TGCGTGAAAA TCCCGAAATC GACCTGGTCC TCATGGACAT CATGATGCCG GTCATGGACG GCTACGAAGC CATGCGTGAA ATCCGCAAAG ATCCCAAGCT CAAAGACCTG CCCATCATCG CCCTGACCGC CAAGGCCATG AAGGGGGACA AAAACGCCTG CATCGAGGCC GGGGCCAACG ACTATCTGGC CAAACCCGTG GACATGGACA AGTTGCTCTC GCTGCTGCGC GTCTGGCTGT ACCGGAAATG A
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Protein sequence | MIFDNIRMKP KLLFLFIMTG IVPLGIVALI GSYSASNALL DLAFEQLGSI QAIKRDKLQT TLTERINGLK LMAGLRQTQQ AVDDLNALGE EDPAQPYPIE SSAYQRIHGR YDSQLKGYIA VNGFEDIYLI DRHSGTVMYA AGQGEELGTS LATGRYRHTA LARLWERVLR SGNVAFEDFS AYEPSGGSQA AFIGYPVLDL QGGVAGVIAA RVSGEFINQI MPSRQGLGKS GESYLLRWLE SQKKFEMRSD IQTMGNGLYV IGYTLPRTPA YWHDAVDKGF DGGGGTYEDS AGTTVLVAFN TLDVLGTNWI LISKINKGEI LRPIWTFLLI ICVTGAVLAL MIAPGAYGLA KGISQPLEQG VNFAEAISAG DLKARLDLRQ KDELGMLAKA LNSMARNLRD MDWLNQGKTG LDDTLRGEHS PQELARLFIS FLCKHLDSQI GLFFLHDDGE LVLTSSYAFT NRQGQFSRLR VGEGLVGQAA LEGEILTFAR VEDGAPPFHF GPGEIVPAHF LAAPVFMGKE LLGAFLVGRE YAFSPLHRQF ITDIAKNTAV LFNMATSRGM IADLLRQAQE QQEMLRVANE ELEEQTNMLK ESQSELQAQQ EELQVTNEEL AEQTRALKES ERRMQDQQNE LRSVNDKLGE RAMELEEQKS AIRRKNKELL RAQEQLKLKA QELESASRYK SEFLANMSHE LRTPLNSILI LSQLLSHNKE GNLSPKQTEA ASAINSSGAD LLRLINEILD LSKVEAGKVE LHLEEMPLTS MISDLQRVFK GVAVEKGVAF LVEQDPALPE TMLTDTHRLQ QVLRNLLSNA FKFTDHGSVT LSISRPGPEV DLPEGIPSAE EAICIAVTDM GIGIPEDKQG TIFEAFRQAD GSTSRKYGGT GLGLSISREL TKLLGGEIRL RSQEGKGSTF SLILPLRHHA DAPTDEIRPR VSAPEPKMTP HQPAKTQAEA PISYLQDDRA NLKPGDKSLL IIEDDQHFAR ILRDQAREMG FKALLAADGE TGLHFADFHG PSAIILDNIL PGMNGWTVME RLKNDPKTRH IPLSFISAED RSLEAMRMGA LAFLTKPVEL ETLRTLLERI DSFIKKPMRR LLVVDDDALQ RESIRALIGN GDVETVTAAS GAEALGLLKS QNFDCMILDL GLNDMSGFDV LRTLRSGPTP STLPVVVYTG RDLSEEEERR LSRYAESIIV KGARSPERLL EETTLFLHRV QANLPQEKQR MLRTDTEPES VLDGRTVLVV DDDMRNIFAL TSVLEEKGMQ VVVARDGSES LTRLRENPEI DLVLMDIMMP VMDGYEAMRE IRKDPKLKDL PIIALTAKAM KGDKNACIEA GANDYLAKPV DMDKLLSLLR VWLYRK
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