Gene Dbac_0016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0016 
Symbol 
ID8375647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp30445 
End bp31185 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content63% 
IMG OID644999244 
Productbeta-lactamase domain protein 
Protein accessionYP_003156562 
Protein GI256827834 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000373362 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCACT TCAGCGCAAT CCACGAAATT GACGCGGGGG AATTTTCAGT CCGCAGCGTC 
TTGATTCGAG GCACCCGCTT TTGCCTGATT TGGGACACCC TGACCAGCCC GCGCGACATG
ACCCGCTTCG CCGAAATCTG CGCCGGGCAG CAGTGCATAG TCGTCTACAG CCACGCCGAC
TGGGACCATG TGCAGGGCAC GGCGGCCTTG CAGAGCCCGA TTATCGTCGG CCACGTGGGC
TGCGCCCATC GCTTCGGCAT CGAGGCCCGG CAGACCCTGG CCGACATGCA AGCCCGCGAA
CCGGGCAAAT GGGACGAGGT CAAGCTCATC CCCCCGCACA TCACCTTCGA GAGCCGCCTT
GATCTGGACC TTGGCGGCAT CACGGTCCAG CTGCACGCCC TGCCTGGGCA TACCCCGGAT
ACCATCGTGG GTTTCATCCC GGAAATGGAA CTCCTGCTGG CCGGGGACGC GGTGGAGTCG
CCCCTGCCCT GCGTGCCCGC AGACTGCGAC CTTGATGCAT GGATAGAGGC GCTGCGCCGC
TGGCGCAAGC ACGAAGGGGT CGGCAAGGTC ATTCCATCCC ATGGCCCGAT GGGCGGCAAG
GACATTCTGG ACAGCACCAT CGACTACCTC GACGGCCTGC GCCGAGGCGA AAACAGAGTC
TTGCCTGAAG GGCTGTCTGC GTTTTACGCC AGTACGCACC TGGACAACAT GAAAAACCGT
AGCACCGGCA CCGGATCGTA A
 
Protein sequence
MSHFSAIHEI DAGEFSVRSV LIRGTRFCLI WDTLTSPRDM TRFAEICAGQ QCIVVYSHAD 
WDHVQGTAAL QSPIIVGHVG CAHRFGIEAR QTLADMQARE PGKWDEVKLI PPHITFESRL
DLDLGGITVQ LHALPGHTPD TIVGFIPEME LLLAGDAVES PLPCVPADCD LDAWIEALRR
WRKHEGVGKV IPSHGPMGGK DILDSTIDYL DGLRRGENRV LPEGLSAFYA STHLDNMKNR
STGTGS