| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_0010 |
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| Symbol | |
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| ID | 8375641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 25254 |
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| End bp | 26585 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644999238 |
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| Product | type I secretion outer membrane protein, TolC family |
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| Protein accession | YP_003156556 |
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| Protein GI | 256827828 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.444301 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGCAA AAAAATTGAG CATTACTCTT GTCCTGGCGG TGATGTTTTC GGCCGGTGTG
GCTCTGGCCG AAGATAGCAT CACCCTTCAG AAAAGCGTTA TCGACACTCT TCGATATGCG
CCGCGCCTGG AAATGATCAA ACACAACCGC GAAGCAGTGG GCCATGATTT GGACAAGTCC
AAGGGCCGCT GGTATCCTAA GCTCGACATT CGTGGCGGAT ATGGAACGGA TTCATACGAC
CAGGAAAACA ATCCTGATGA TAGTGATTGG GATTCCCGCG GAGAGATTTC CGCGATTCTG
AGCCAGCGCC TCTATGACGG TGGCGAGGGT TTCAGTCAGA TTCGTCTGGA TGAAAGACGT
GCGGCTTCCT TGGACTATCG CGTCTTCGAC AACGCCGAGT CCCTGGCCCT GGATGCGGTC
ATCGCCAATA TGGAAGTTTA CCGTCAGCGT GAACTGCTCT TCCTGGCCGA AGAAAACGCC
AAGGCCCATC GCGATATTCT GGGCTCTCTG CAGGAACGCG AAGAGGCCGG TGCGGGTAGC
GTGGCCGACG TGAAACAGAC CCAGGCCCGC CTGTCCATGG CCCAGGCCTC CATCGAAAAG
ACCCGTACGG CTTTGCAGGC AGCCTTGAAT GAATACCAGC GTCTGACCGG AGTCCTGCCC
GGCAAGATCG CCATGGCGCC CTATCCGCAG AACCTCATTC CCGCTTCTCT GGATGAAATG
ACTGCCCAGG CCATCGGCAA CAATCCCAAG ATCAATGCCG CAGGTGAAGA CGTCAACGCT
GAAACCGAGC GCGTCAACAT CGCCAAGGCG AATTATCATC CTTACGTTTA TGCCGAACTG
TCTTCCTCTT ATTCGGACGG CGTTGAAAAT CAGGAATATT GGGAGCGCAC TGACGCGGCC
ATGGTCCGCT TCAACTGGAA TCTGTTCAAT GGTGGCTCCG ATGTCGCCGC TCACAAGGCT
ACCAAAGCCC GCAAGCGCCA GGCCCAAGCC GACAAGTACG ACCTGACCCT TGCGGTCGAG
AACGAGACCA AGACCACTTG GGCGCAGTAC AAGTCCTCGC TGAGCGAAGT GAAGGAATAC
ACCGAGGCCG TGCAGTACAA CCGCGACACC AAGGGGATCT ACCTGGAGCA GTTCGGCGTG
GCACAGCGCA GCTTGCTCGA TGTGCTCGAT TCCGAGAACG AAGTGTTCCA GTCTTCCAGT
CAGTTGGTCA CTTCCAGCGT GAATGAGCAG ATCGCGGCCT ACAAGCTTCT GGCCCTGTCA
GGCAACCTGA TCACGGCTCT TGGAGTTGAT CCGGCCCTGT ACAAGGACCC CGCCGCTCAG
ATTGAAGAAT GA
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| Protein sequence | MNAKKLSITL VLAVMFSAGV ALAEDSITLQ KSVIDTLRYA PRLEMIKHNR EAVGHDLDKS
KGRWYPKLDI RGGYGTDSYD QENNPDDSDW DSRGEISAIL SQRLYDGGEG FSQIRLDERR
AASLDYRVFD NAESLALDAV IANMEVYRQR ELLFLAEENA KAHRDILGSL QEREEAGAGS
VADVKQTQAR LSMAQASIEK TRTALQAALN EYQRLTGVLP GKIAMAPYPQ NLIPASLDEM
TAQAIGNNPK INAAGEDVNA ETERVNIAKA NYHPYVYAEL SSSYSDGVEN QEYWERTDAA
MVRFNWNLFN GGSDVAAHKA TKARKRQAQA DKYDLTLAVE NETKTTWAQY KSSLSEVKEY
TEAVQYNRDT KGIYLEQFGV AQRSLLDVLD SENEVFQSSS QLVTSSVNEQ IAAYKLLALS
GNLITALGVD PALYKDPAAQ IEE
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