| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_0004 |
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| Symbol | |
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| ID | 8375635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | - |
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| Start bp | 4946 |
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| End bp | 6274 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644999232 |
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| Product | type I secretion membrane fusion protein, HlyD family |
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| Protein accession | YP_003156550 |
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| Protein GI | 256827822 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.197437 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAATA AAGTATACTC CGACTCAGAC CTTGAATACA TGAGCGTGGT CGACGCGGCC
ATGTATCGCC GGGGTCACCG CTGGGCCTAC GCGTTGTCCA TGACCATCTG CCTGCTCCTT
GCCTCGCTCC TGGTCTGGAC CCACTTCGCC ATCCTCGACG AGGTCACGCG CGGCATGGGC
CAGGTCATCC CGTCCCAGCG GGTGCAGATC ATCCAGAATC TCGAAGGCGG CATTTTGGTC
GAAACCCTGG TGCGGGAAAA CCAGCTCGTG GAAAAAGGCG ACATCCTGGT CCGCATCAGC
AACGAAATGG CCCAGAGCAC CCTGAAGGAC ACGGCCAGCC AGGCGCTGGA GCACCAGGCC
GCCATCGCCC GCCTCAAGGC CGAATCCTCG GGCACGGAGC CCGTATTTCC CGAAGAACTG
CAGACCAAGA ACCCGAAAGC GGTGAGTGAC CAACTGGCCA TATACCAGGC ACGCATGAAC
CAACTGACCC AGGAGATGAA CATTCTGCGC AGCCAATACA CGCAGCGCGT GCAGGAAGCC
CAGGAAATGG CCATCCGCCG CAATCAGGCG GCCCAGGACC TGAAGCTGGC CCAGGAACAG
ATGAATATCG CCAAGCCGCT GATGGAGAAG AACGTGTATC CCCGGGTCGA ATACATCTCC
CTGCAGCGCA CCGTCAGCTC CCTGCGCGGC GACCTGCAGA GCCTCAACGT GGCCATCCCG
CGCACGCAGC AGGCGGCGCA GGAAATCAAG GAACGCCAGG CCCAGCGCAT GGCCGAGTTC
AAGGCCACGG CCCTGCAGGA GATGAACCAG CACCAGGTGG AGCTCAATTC CAAGCTGCAC
GCCTTGTCCG CCGGCCAGGA CCGCGTCACG CGCACGGACG TGCGCAGCCC TGTGCGAGGG
ACGGTCAAGC AGGTCATCCT GAATACCGTG GGCGGCGTGG TCAAACCGGG AGAACCCATC
CTTGAGATCA TTCCCCTGGA CGACACCCTG CTCATCGAGG CCAACATCAA ACCCGCCGAC
ATCGCCTTTC TGCATCCGGG CCAAAAGGCC ATGATCAAGA TCACGGCCTA TGATTTTTCC
ATCTACGGAG GGCTCGAAGG TTCCGTCGAA CAGATCAGCG GCGACACCAT TGAAGACCAG
AAGGGCGAAA GCTTCTACAA GGTCAAGCTG CGCACCCAGG CCTCAAACAT TGTCTATCGC
GGCGAAAAGC TCCCGATCAT CCCGGGCATG ACCGCCAGCG TGGACATCCT GACCGGCAAG
AAAAGCGTGC TCGACTATCT CTTGAAACCC ATTCTCAAGG CCAAGGAGAA CGCCTTGAGG
GAGCGTTGA
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| Protein sequence | MRNKVYSDSD LEYMSVVDAA MYRRGHRWAY ALSMTICLLL ASLLVWTHFA ILDEVTRGMG
QVIPSQRVQI IQNLEGGILV ETLVRENQLV EKGDILVRIS NEMAQSTLKD TASQALEHQA
AIARLKAESS GTEPVFPEEL QTKNPKAVSD QLAIYQARMN QLTQEMNILR SQYTQRVQEA
QEMAIRRNQA AQDLKLAQEQ MNIAKPLMEK NVYPRVEYIS LQRTVSSLRG DLQSLNVAIP
RTQQAAQEIK ERQAQRMAEF KATALQEMNQ HQVELNSKLH ALSAGQDRVT RTDVRSPVRG
TVKQVILNTV GGVVKPGEPI LEIIPLDDTL LIEANIKPAD IAFLHPGQKA MIKITAYDFS
IYGGLEGSVE QISGDTIEDQ KGESFYKVKL RTQASNIVYR GEKLPIIPGM TASVDILTGK
KSVLDYLLKP ILKAKENALR ER
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