Gene Dbac_0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0003 
Symbol 
ID8375634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3859 
End bp4848 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content60% 
IMG OID644999231 
Producttransglutaminase family protein cysteine peptidase BTLCP 
Protein accessionYP_003156549 
Protein GI256827821 
COG category[S] Function unknown 
COG ID[COG3672] Predicted periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.11115 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCACGACC AGCCCGCCCA GACGAAGCAC GCACGGGCAG ACACGAACGC CGGAACAATG 
ATCTCTGCCC GGCCCGAGCA GGAACACAAC GCCACGAGAT CGGCCTCGCC GCAAGAAATG
CAAACGGATG TTCAACCGGA CCAAAAACCG GACCAGGTTG CGGATCCTCA TGTTCAGACG
GAACAAAGCC AGCCCCCGGA CACACAGGCA AGCGTCCCTG CGGAGCAAGC CCCGGTCACG
GAAGCGGATG CAGCTTTGGC GCAAGACCTG GATTCAAACG CGCCGGAGGG AACTCAGGCG
CAGCAGAATC AGGATTCGCC GACGCAAAGG GCGGCCCTGC CGGTATGGCG CCAGGGCACG
CAGACCCAGC CCGCAGCGCC ATTGGAACAA GCCCGGAGCG CCGGCGCAGA CACCGGCGGT
CAGCCGCTGC GACTTTTTCA GAGCGCGGCC TTTCGGGGCA ATTTCAACGC CCTGCCCAAA
TGGAAACGGA TTTTGTCCAA GGTCAAGGGG CAAATCCAGA CGCTAAGCAG CTGCACTTCG
GCCACGGCCT GTCCGCCCGG CGCGACCAGT TGGCAGCGCA TCATGAAACA GGCCAGGGGC
AAGGAGCGCA TGGAACAGCT CAAGATGATC AACTCCTTTT TCAACAAATG GCCGTATCGC
CTGGACCAGG ACGCCTACGG GGTCTCGGAC TGGTGGGCCA CGCCCCAGGA ATTTTTAAAA
ATTTCCGGCG ATTGCGAGGA TTACGCCATC ATCAAGTACT TTGCCCTGCG GGAGCTCGGC
TTTTCGCAGA ACGAGCTGCG CATCGTCGTG CTGAAGGACC GCATCAGAGG CATCGCGCAC
GCTGTTCTGG CAGTATTTAC GCATGGAGAT GCCTACATCC TGAACAACAT CTCCGACGCG
ATTTTCACGC ACGACAAGTA CAGACACTAC GTTCCGCAAT ACTCTTTGAA CGAGGAGCAC
CGATGGTCGC ACATCCCTGT GGCGAACTAA
 
Protein sequence
MHDQPAQTKH ARADTNAGTM ISARPEQEHN ATRSASPQEM QTDVQPDQKP DQVADPHVQT 
EQSQPPDTQA SVPAEQAPVT EADAALAQDL DSNAPEGTQA QQNQDSPTQR AALPVWRQGT
QTQPAAPLEQ ARSAGADTGG QPLRLFQSAA FRGNFNALPK WKRILSKVKG QIQTLSSCTS
ATACPPGATS WQRIMKQARG KERMEQLKMI NSFFNKWPYR LDQDAYGVSD WWATPQEFLK
ISGDCEDYAI IKYFALRELG FSQNELRIVV LKDRIRGIAH AVLAVFTHGD AYILNNISDA
IFTHDKYRHY VPQYSLNEEH RWSHIPVAN