| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_30980 |
|---|
| Symbol | |
|---|
| ID | 8401642 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | + |
|---|
| Start bp | 3507379 |
|---|
| End bp | 3508383 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 644999129 |
|---|
| Product | universal stress protein UspA-like protein |
|---|
| Protein accession | YP_003156448 |
|---|
| Protein GI | 257070193 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.34325 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACGACG ACGGCTTCAC CTCGCAGGTC CCGATCCCGG AGAGCCCCGA CGCGCGCCCG
CTCGGCGTGC TCGTCGGCTA CGACGGCTCG GACCAGGCCG TCCGCGCCCT GCTGTACGCG
GCCCGCGCCG CGCAGCGCCT GGACACCATG CTCACCGTCG TCACCGCTTA CACGGTGCCG
ACCCTCGCCT ATGCCGACGC CGCCCTCGTC CCCACGGTGC CTGCGGCGGT GGCCCGCCTG
GCCGCCGCGC AGACCCAGCT CGAGGAGGCG CAGGAGCATC TTCGCGGCTA CCCCGGAGAG
GTCGATCTGC GCACCGAGCA CGGCGACGCC GCCGGGGTGC TGGTGAAGCT CTCCGACCAG
GCGCAGCTCG CGGTGGTCGG CTCCCGCGGC CGCGGCGGCT TCTTCGGCCG GATGCTCGGC
TCCGTCTCCT CGGCGCTGCC GGCCCACGCG CACTGCCCCA CCGTGGTGGT CCCCCGCCAG
TACGAGATGG GCGCCGCCGA GGGCGCGGCC CGCTTCACGC CGGTCGACGA GGACACCCCC
GTGGTGGCCG GGGTGGACCG CTCCCCGGCC AGCCGGGACA CGGCACGGCA CGCCGCCATC
GCCGCCCGCA CCCGCACCGC GCCGCTGCAC CTGCTGATGG TGATGCCGCT GCTGGAGGAC
TGGGGCGGCG CCTCGATGGC CTGGCTGCCG GACCCGGATC TCCTCGAACG CCACCGCCGC
GAGCTCGCCG ATCAGCTCGA GGCCGATGCG GAGACGCTGC GGGGCGAGTT CCCGGAGCTG
ACGATCACCA GCGAGACGGT GCTGGCCGAG CCGGTCTCGG CCCTGCTCGA ACGGACTGCG
ACCTCCCAGC TCACGGTGCT CGGCACGCGC GGGCACGGGC GCGTGGCCAG CACGCTACTG
GGCTCGGTCT CGCGCGCGGT GCTGCAGCGT GCGGAGGGCC CGGTGATGGT GGTGCCCGCC
CCCGTGCCCG GCGATGCGGC GACGGAGCCC GCACCCACAC GCTGA
|
|---|
| Protein sequence | MHDDGFTSQV PIPESPDARP LGVLVGYDGS DQAVRALLYA ARAAQRLDTM LTVVTAYTVP
TLAYADAALV PTVPAAVARL AAAQTQLEEA QEHLRGYPGE VDLRTEHGDA AGVLVKLSDQ
AQLAVVGSRG RGGFFGRMLG SVSSALPAHA HCPTVVVPRQ YEMGAAEGAA RFTPVDEDTP
VVAGVDRSPA SRDTARHAAI AARTRTAPLH LLMVMPLLED WGGASMAWLP DPDLLERHRR
ELADQLEADA ETLRGEFPEL TITSETVLAE PVSALLERTA TSQLTVLGTR GHGRVASTLL
GSVSRAVLQR AEGPVMVVPA PVPGDAATEP APTR
|
|---|
| |