| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_30890 |
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| Symbol | |
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| ID | 8401633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Brachybacterium faecium DSM 4810 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013172 |
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| Strand | - |
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| Start bp | 3494893 |
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| End bp | 3496611 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644999120 |
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| Product | choline/carnitine/betaine transport |
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| Protein accession | YP_003156439 |
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| Protein GI | 257070184 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCTGG ACGCCCCCTT GGACCCCCTT CCCGCCGAGC CTCGTCCGGG AAGCGAGGTC
GATCTCGCCG ATCCCCCGAC CGGCGACCTC TCCGCCGAGG CTGACGACGA CCACCCCGCC
GAGGCCGACG ACGACCACCT CGCCGAGGCC GACGACGACC CGGGACCGCG CCGCGCCCGG
CGCCTGGCCG ACCGCTTCCC CAGCGCCCCG CAGGTCCCCG GCAGCGCGAG CGGCGCCGTG
GTGTGGGTGG CCGTGGCGCT CATCCTCGCC CTCCTCGCCG CCGCCGGCTT CTGGCCGGCG
CAGATGACCT CCGCCGCCGA CGCGGCGATG CAGTGGGTGA CCACCACCGG CGGCTGGTCC
CTGCTGCTGA TCCCGCTGTG CCTGATCGCG CTGCTGCTGG TCCTGGCCTG CACCCGCTTC
GGCGACCTCC GCCTGGGCCC GGACGACTCC CGGCCCGAAT ACCCCACCTT CGCGTGGATC
GCGATGCTGC TGGGCGCGGT GATGGGCATC GGGATGGTCA CCTACGGCGT CGCCGAACCG
GTCTCCCACC TGGTCACCCC GCCGCACGGC CTCACCGAGC CCGGCAGCCG GGAGGCCGTG
GTCGACGCCC TGCGCTTCAC CTTCCTGGAC TGGGGCCTGC ACGCCTGGGC CGTGTTCGCC
ACCTTCGGCC TGGCGATCGG CTACTCCACC CACCGCCTCG GGAACAAGGG CCTGGTCTCG
CCGATCCTGC GGCCCCTGCT CGGACGTCAC GCCGACGGCC CCGCGGGCAA GGCGATCGAC
GTGCTGGTCA TCCTGTCCAC CCTGTTCGGC ACCACCACCT CGCTCGGACT CGGAGCCGCC
CAGATCAGCC AGGGGATGAG CCGGATGACC GGCCTCGACC TCACCACCAC CGGCGTGCAG
CTGATCATCA TCGCGCTGGT CACCGTGCTG TTCACCGCCT CGGCGATGAG CGGGATCGGG
CGCGGGATCC GCTACCTGAG CCAGGCCACG ATGGTGATCG CCGCGGCGCT GCTGCTGTTC
GTCCTGGCCA CCGGCCCCAC CAGCTGGCTG ATCAACCTCT TCCTCCGCTC GCTCGGCGGG
TACGCCGGCG GATTCGTCGA GATCAGCCTG CTGCTGCCCA CCGACGGCGC GGACCTGGCC
TGGATGCAGG GGTGGACCTA CTTCATGATG GCCTGGTGGA TCTCCTGGGG CGCCTTCGTG
GGGATCTTCC TGGCCCGCAT CTCGCGCGGC CGCACCATCC GGCAGTTCGT GCTGGTGGTG
CTCGGCGTGC CGAGCCTGAT CTTCTCCGCC TGGTTCACCG TGTTCGGCGG CTCGGCGATG
TTCCTGGACC TCGAGCGCGA CGCCGGGATC GGCGAGGCCG CGACGGAGAA CGTCAACACC
GCCTTCTTCG CCCTGCTCGA CCAGCTGCCG CTGACGGGGC TCACCTCGGT GGTCGCCGTG
GTCCTGGTGA TCATGTACTT CGTGACCAGC GCGGACTCGA ACACCTACGT GCTCGCGGTG
ATCTCCTCCG ACGGGCGCCT GCACCCCAGC CGCCCGCTGA TGGGCCTGTG GGGCGTGCTC
ACCGGGGCGA CAGCCGCGGT GCTGCTCTAC GCCGGCGGGC TGGAGGCGCT GCAGACGGCG
GTGATGCTCT CCGCGGCGCC GTTCATCTTC GTGATCCTCG CGCTCGCGGT CTCCCTGGTG
ATGATGCTGC GCCGCGACCC GCTGGTCCGC GCCGGCTGA
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| Protein sequence | MPLDAPLDPL PAEPRPGSEV DLADPPTGDL SAEADDDHPA EADDDHLAEA DDDPGPRRAR
RLADRFPSAP QVPGSASGAV VWVAVALILA LLAAAGFWPA QMTSAADAAM QWVTTTGGWS
LLLIPLCLIA LLLVLACTRF GDLRLGPDDS RPEYPTFAWI AMLLGAVMGI GMVTYGVAEP
VSHLVTPPHG LTEPGSREAV VDALRFTFLD WGLHAWAVFA TFGLAIGYST HRLGNKGLVS
PILRPLLGRH ADGPAGKAID VLVILSTLFG TTTSLGLGAA QISQGMSRMT GLDLTTTGVQ
LIIIALVTVL FTASAMSGIG RGIRYLSQAT MVIAAALLLF VLATGPTSWL INLFLRSLGG
YAGGFVEISL LLPTDGADLA WMQGWTYFMM AWWISWGAFV GIFLARISRG RTIRQFVLVV
LGVPSLIFSA WFTVFGGSAM FLDLERDAGI GEAATENVNT AFFALLDQLP LTGLTSVVAV
VLVIMYFVTS ADSNTYVLAV ISSDGRLHPS RPLMGLWGVL TGATAAVLLY AGGLEALQTA
VMLSAAPFIF VILALAVSLV MMLRRDPLVR AG
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