| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_29850 |
|---|
| Symbol | |
|---|
| ID | 8401529 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | - |
|---|
| Start bp | 3376512 |
|---|
| End bp | 3377465 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644999017 |
|---|
| Product | transcriptional regulator with sigma factor-related N-terminal domain |
|---|
| Protein accession | YP_003156336 |
|---|
| Protein GI | 257070081 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2390] Transcriptional regulator, contains sigma factor-related N-terminal domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTCGAGA CGTCGATGGA CCTGCATCTG CTCCATCGCG CCGCCTCCGC GTACTACCTC
GACGGGCTGC GCCAGGCCGA GGTCGCCGAC AAGATCGGCG TCTCCCGCCC CTCCGTCAGC
AAGCTGCTGG CCGAGGCTCG ACGGATCGGC ATGGTCCGCT TCGACGTGCT CGACGTGCCC
ACGGTCGATC TCACCGAGCT CGCCGCCCGG CTGCGGGAGC TGCTGGGCAT CGAGTCCGTG
CGGATCGCGC CCGGTGACCA GGTGCAGCGC GACTATCGGG GGATCGGGGA CCTGCTCGCG
GAGGAGCTGC GCGAGCTCGA GATCCGCAGC GGCGAGGTCG TCCTGGTCTC CTCGGGCAAG
ACCATCCACG CCGTCACCGG GATGGGCGGG ATGCCGCAGA TGCCCGGGGT GCTGATCGTC
CCCACCGTCG GCGGGCAGCA GGAGCCCGAT CCGTCCTTCC AGACCAACGA GACCGTGCGG
CGCTTCGCCG ATCGCACCGG TGCGCAGCCC CGCTTCATCT TCGCGCCCGC GCTCACGAGC
CCCACCCTGT GGGCATCGCT GCAGGCCGAT CCGGGATTCC GCTCCGTCGT GGACCTCTGG
GACGGCGCCC GCGCCGCCGT GGTCGGAGTG GGCGGGCCCT ACCGCGGCCG CACCAGCCTC
ACCTCGGTGG TGCCGCGCCA CGAACCCACC CTCGAGAGCG CCGCGGGCGA CATCTGCCTG
CACTTCTTCG ACGCCGACGG CGCGACGCTC ACCTTCCCCG GCTCCGAGTT CCTGGTGCGG
CTCCCGCTCG AGGTGCTGCG GGCGATCCCC TCCACGATCG CCCTCGCCGC GGGCCGCGAG
AAGGCCCCCT CGATCCGCGC CGGCGCCAAG GCGGGGCTGT TCACCTCGCT GGTCACGGAC
GTGCCGACGG CCGAGGCCGT GCTCGCCGAG GCCGGCATCG AGCTGCCCGC CTGA
|
|---|
| Protein sequence | MLETSMDLHL LHRAASAYYL DGLRQAEVAD KIGVSRPSVS KLLAEARRIG MVRFDVLDVP
TVDLTELAAR LRELLGIESV RIAPGDQVQR DYRGIGDLLA EELRELEIRS GEVVLVSSGK
TIHAVTGMGG MPQMPGVLIV PTVGGQQEPD PSFQTNETVR RFADRTGAQP RFIFAPALTS
PTLWASLQAD PGFRSVVDLW DGARAAVVGV GGPYRGRTSL TSVVPRHEPT LESAAGDICL
HFFDADGATL TFPGSEFLVR LPLEVLRAIP STIALAAGRE KAPSIRAGAK AGLFTSLVTD
VPTAEAVLAE AGIELPA
|
|---|
| |