| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_29670 |
|---|
| Symbol | |
|---|
| ID | 8401511 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | + |
|---|
| Start bp | 3351196 |
|---|
| End bp | 3353520 |
|---|
| Gene Length | 2325 bp |
|---|
| Protein Length | 774 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644998999 |
|---|
| Product | alpha-L-rhamnosidase |
|---|
| Protein accession | YP_003156318 |
|---|
| Protein GI | 257070063 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTCTG CCCCCGCCTC CCCCGCCGAC ACTCCGAGCG CCGGGGCGGG CCGCCCGGCC
GCACAGCTCC AGGACGCCCT GGCGATCACC GCGGTGGAGG ACACCGGCCG CCTCCCGCAG
CTGGTCCACA CGGTGACGCT CGCACAGCCG CGGGACCAGG TGCGGCGCGC CGAGCTGCTG
GCCACCGCCC ACGGCCTGTA CGAGATGAGG ATCGGCGGCG CCCCGGCGAC GGAGTCGGTG
CTGAACCCCG GATGGACCAC CTATGAGCGC CGCCTCCAGG TGCAGCGTCT GGATGTCACC
GCCCAGGTCC GTCAGCGCCC GGAGGGTCTC GCCGCAGCGG ACGCGGACCG CCTCGATCTC
GAGGCCACGC TCGCCGACGG CTGGTGGCGC GGGGACCTGG GCTTCGACGG CGGGGTGCGC
TACGGCGACG ATCTCGCCCT CCTCGCCGCC GTGGAGATCG AGTTCGCGGA CGGCACCCGC
CAGCGGGTGG TCACCGACGA GTCCTGGCGC TCCCGGCCCA GCGCGATCAT GAGCGCGAAC
ATCTACCACG GCCAGCACGA GGACCGCCGC CTGGGCCTCG GCCCCGAGAC ACCGGTGCGC
GTGGTCGAGA TCGATCGCAG CACGCTCGTC GAGCAGGTCT CCCCGCCGGT GCTCCGCCAC
GAGTCGCGCC GGCCCGAGCG GATCTGGACC TCGCCCGCGG GGCGCACGCT CGTGGACTTC
GGCCAGAACC TCGTGGGGTG GCTGCGGTTC ACGGTCACGG GCCCCGAGGG CACCGAGATC
GTGCTGCGCC ATGCCGAGGT GCTCGAGGAC GGCGAGCTCG GCACGCGACC GCTGCGCGCC
GCCCGCGCCA CCGATCGTCT GGTCCTCGCC GGCGACCCGG CCGGCGAGAC CTTCGAGCCG
ACCTTCACCT TCCACGGCTT CCGCTACGCC GAGATCAGCG GCTGGCCGGG AGAGCTCGCG
GCGGAGGATC TCGAGGCCGT GGTGGTCCAT TCCGCGCTGC GGCGCACCGG CTGGTTCGAG
TGCTCGCATG CCGGGGTGAA CCAGCTGATC AGCAACTCGC TCTGGTCCCA GCGCGGCAAC
TTCCTCTCCG TGCCCACCGA CTGCCCGCAG CGCGACGAGC GGCTCGGCTG GACGGGCGAC
ATCGCCGCCT ACGCGGCGAC CGCCGCGTTC CAGCACGACG TGGGGGACTT CCTGCACGGC
TGGCTGCTCG ATCTGGGCCA GGAGGCGCGC ATGAACCCGC ACGGGATCGT GCCCTTCGTG
GTCCCGGACC TGCTCAAGCC CGGCCTCGGC GCCGGCGATC CTGCCGCGGC CGACGAGGGC
TGGGGCACTC CCACCGCGAT CTGGGGCGAC GCCGCCGTCT GGGTCGCCGA GGCGCTGTGG
ACCGCCTACG GGGACCTGGA CCGGCTGCGC GCGCACTACC CCGCCATGGT GCGCCACCTG
GACTCCGTCG ACCGCGCGCT GTCCCCCAGC GGGCTGTGGG ACACCGGCTT CCAGTTCGGG
GACTGGCTGG ACCCCGACGC CCCGCCGGAG GCCGCGGACC GGGCGAAGGC CGACAAGGGC
GTGGTCGCCA CGGCCTGCCT GGTGCGCTCC GCACGCTTCG CCGCACAGGC CGCCCGCCTG
CTCGGCGAGG AGGTCGACGC CCGCCGCTGG CAGGGCCTGG CCGAGCGCAC CCTCGCCGCC
TTCACCACCG CCTATGTGCA TGAGAACGGC ACCATCACCT CCGACTGCGC CACCGTGTAC
GCCCTCGCGA TCGCCTTCGA CCTGCTCGAT GCCGGGACGC GCCCCCGCGC CGCCGCGCGG
CTCGCGGAGG TGGTCGCCGA GGCCGGCCAC CGGGTCTCCA CCGGCTTCGC CGGGACGCCG
TTCGTCACCT GGGCGCTGTC CGAGACGGGG CACGTGGAGG AGGCCTACCG CCTGCTGCTC
GAGGAGGGGT GCCCCTCGTG GCTGTACCCG GTCTCGATGG GTGCCACCAC GATCTGGGAG
CGCTGGGACT CGATGCTGCC GGACGGCTCG ATCAACCCCG GTGAGATGAC GAGCTTCAAC
CACTACGCCC TCGGCGCCGT CGCGGACTGG GTCTACCAGG TCGTCCTCGG CGTCCGGCCC
GCCGCCCCGG GATATCGCCG GATCCGCATC CAGCCCGTTC CCGGCCCCGG GATCGAATGG
GCCGAGGGCG CCCACGACTC CGCGGCCGGC CGCATCGAGG TCTCCTGGGA GCATTCCGCC
GACGGGCTGC GCGGCACCGC CACGATCCCC GAGGGCGCCG AGGCGGAGAT CGTGCTGCCC
GACGGCCGGG CCCGCACCGT CGGCCCGGGG CGGCACAGCT TCTGA
|
|---|
| Protein sequence | MNSAPASPAD TPSAGAGRPA AQLQDALAIT AVEDTGRLPQ LVHTVTLAQP RDQVRRAELL
ATAHGLYEMR IGGAPATESV LNPGWTTYER RLQVQRLDVT AQVRQRPEGL AAADADRLDL
EATLADGWWR GDLGFDGGVR YGDDLALLAA VEIEFADGTR QRVVTDESWR SRPSAIMSAN
IYHGQHEDRR LGLGPETPVR VVEIDRSTLV EQVSPPVLRH ESRRPERIWT SPAGRTLVDF
GQNLVGWLRF TVTGPEGTEI VLRHAEVLED GELGTRPLRA ARATDRLVLA GDPAGETFEP
TFTFHGFRYA EISGWPGELA AEDLEAVVVH SALRRTGWFE CSHAGVNQLI SNSLWSQRGN
FLSVPTDCPQ RDERLGWTGD IAAYAATAAF QHDVGDFLHG WLLDLGQEAR MNPHGIVPFV
VPDLLKPGLG AGDPAAADEG WGTPTAIWGD AAVWVAEALW TAYGDLDRLR AHYPAMVRHL
DSVDRALSPS GLWDTGFQFG DWLDPDAPPE AADRAKADKG VVATACLVRS ARFAAQAARL
LGEEVDARRW QGLAERTLAA FTTAYVHENG TITSDCATVY ALAIAFDLLD AGTRPRAAAR
LAEVVAEAGH RVSTGFAGTP FVTWALSETG HVEEAYRLLL EEGCPSWLYP VSMGATTIWE
RWDSMLPDGS INPGEMTSFN HYALGAVADW VYQVVLGVRP AAPGYRRIRI QPVPGPGIEW
AEGAHDSAAG RIEVSWEHSA DGLRGTATIP EGAEAEIVLP DGRARTVGPG RHSF
|
|---|
| |