Gene Bfae_29640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_29640 
Symbol 
ID8401508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp3346344 
End bp3348395 
Gene Length2052 bp 
Protein Length683 aa 
Translation table11 
GC content71% 
IMG OID644998996 
Productshort chain dehydrogenase 
Protein accessionYP_003156315 
Protein GI257070060 
COG category[S] Function unknown 
COG ID[COG3347] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02632] rhamnulose-1-phosphate aldolase/alcohol dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAGA GGACCGCTGT GAACGAGACC GTCGCCGCCC TGCTGGAGCG CTCGAACGCG 
CTGGGCTCCG ATCCGCGCAA CACCAACTAC GCCGGCGGCA ACACCTCCGC CAAGGGCTCC
GCGACCGACC CCGTGACCGG GGAGGAGACC GAGCTGCTGT GGGTCAAGGG CTCCGGCGGG
GACCTCGGCA CGCTCGAGGA GAAGGGCCTG GCGGTGCTGC GCCTGGACCG GGTGCGCGCC
CTGCAGGACG TCTACCCGGG CGTCGAGCGC GAGGACGAGA TGGTCGCGGC CTTCGACTAC
TGCCTGCACG GCAAGGGCGG GGCCGCCCCC AGCATCGACA CCGCGATGCA CGCCCTGGTC
GACGCCGAGC ACGTCGATCA TCTGCATCCC GATGCGGGCA TCGCGCTGGC GACCGCGGCC
GACGGGGAGC GCCTGACCCG CGAGTGCTTC GGCGAGGCCG TGGTGTGGGT GCCGTGGCGC
CGGCCCGGCT TCCAGCTGGG CCTGGACATC GCGGAGATCA AGCGCGAGAA CCCCGGCGCG
ATCGGCTGCA TCCTGGGCGG GCACGGCATC ACCGCCTGGG GCGAGACCTC CCAGGAGGCG
CAGGAGAACT CGCTGCGGAT CATCCGTGAG GCGACCGAGT TCATCGAGCG CACCGGCACC
CCCGAGCCTT TCGGCGCGCA TGATCCTGCG CGTGCCGCGC TGCCGGAGGC GGAGCGGCGC
GCGAAGGCGT CGGCCCTGTT CCCGGTGATC CGGGGCCTGG CCTCGACGGA TACGCCGATG
GTCGGGCACT TCACGGACAC CGAGGCGGTG CACGAGTTCC TCGCCTCCGA GAAGCTCTCG
ACGCTGGCTG ATCAGGGCAC GTCGTGCCCG GACCACTTCC TGCGCACCAA GGTCAAGCCG
CTCGTGCTGG ACCTGCCCGC GGACGCCTCG ATCGAGGACT CCGTGGCGCG GCTCAAGGAG
CTGCACGAGT CCTATCGCGC GGACTACACC GCCTACTACG AGCGCCATGC CGATGCCGAC
TCCCCCGCCA TGCGCGGCGC GGATCCGGCG ATCGTGCTGA TCCCGGGCGT GGGCATGTTC
TCCTTCGGCG CGGATGCGCA GACCGCCCGC GTGGCCGGCG AGTTCTACGT CAACGCGATC
AACGTGATGC GCGGCGCGGA GGCGATCTCC ACGTACTCCC CCATCGAGGA GTCGGAGAAG
TTCCGCATCG AGTACTGGGC GCTCGAGGAG GCGAAGCTGC AGCGCAAGCC GAAGCCCAAG
CCGCTCGCGA CCCGGGTGGC GCTGGTGACC GGCGGCGGCT CCGGCATCGG CAAGGCCACC
GCCGAGCGGC TCGTGGCCGA GGGCGCCTGC GTGGTGATCG CGGATCTCAA CCTCGAGGGC
GCCGAGGCCA CCGCCGCGGA GCTGGGCGGG CCGGACCGGG CTGTCGCCCT GCGGGCCGAC
GTCTCCGATG AGCAGGCCGT GGTCGAGGCG GTGGCCGAGG CGGTGCTCGC CTTCGGGGGC
CTCGACCTCA TCGTCAACAA CGCCGGGCTC TCGCTGTCCA AGCCGCTGCT GGAGACCACC
GCGAAGGACT GGGACCTGCA GCACGACGTG ATGGCGCGCG GCAGCTTCCT CGTCTCCCGC
GAGACGGCCC GGGTGATGAT CGACCAGGCC ATGGGCGGGG ACATCATCTA CATCTCCTCG
AAGAACTCCG TGTTCGCCGG CCCCAACAAC ATCGCCTACT CGGCGACGAA GGCCGATCAG
GCGCACCAGG TGCGGCTGCT CGCGGCGGAG CTCGGCGAGC ACCAGATCCG CGTCAACGGC
ATCAACCCCG ACGGGGTGGT GCGCGGCTCC GGCATCTTCG CCGGCGGCTG GGGCGCCTCG
CGCGCGAAGG TGTACGGCGT GGAGGAGGAG AAGCTCGGCG AGTTCTACGC CCAGCGCACC
CTGCTGAAGC GCGAGGTGCT TCCCGCGAAC GTCGCGAACG CCGTCTTCGC GCTCACCGCC
GGGGACCTCT CGCACACCAC CGGCCTGCAC ATCCCGGTCG ACGCCGGGGT CGCGGCGGCG
TTCCTGCGAT GA
 
Protein sequence
MSERTAVNET VAALLERSNA LGSDPRNTNY AGGNTSAKGS ATDPVTGEET ELLWVKGSGG 
DLGTLEEKGL AVLRLDRVRA LQDVYPGVER EDEMVAAFDY CLHGKGGAAP SIDTAMHALV
DAEHVDHLHP DAGIALATAA DGERLTRECF GEAVVWVPWR RPGFQLGLDI AEIKRENPGA
IGCILGGHGI TAWGETSQEA QENSLRIIRE ATEFIERTGT PEPFGAHDPA RAALPEAERR
AKASALFPVI RGLASTDTPM VGHFTDTEAV HEFLASEKLS TLADQGTSCP DHFLRTKVKP
LVLDLPADAS IEDSVARLKE LHESYRADYT AYYERHADAD SPAMRGADPA IVLIPGVGMF
SFGADAQTAR VAGEFYVNAI NVMRGAEAIS TYSPIEESEK FRIEYWALEE AKLQRKPKPK
PLATRVALVT GGGSGIGKAT AERLVAEGAC VVIADLNLEG AEATAAELGG PDRAVALRAD
VSDEQAVVEA VAEAVLAFGG LDLIVNNAGL SLSKPLLETT AKDWDLQHDV MARGSFLVSR
ETARVMIDQA MGGDIIYISS KNSVFAGPNN IAYSATKADQ AHQVRLLAAE LGEHQIRVNG
INPDGVVRGS GIFAGGWGAS RAKVYGVEEE KLGEFYAQRT LLKREVLPAN VANAVFALTA
GDLSHTTGLH IPVDAGVAAA FLR