Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bfae_29640 |
Symbol | |
ID | 8401508 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brachybacterium faecium DSM 4810 |
Kingdom | Bacteria |
Replicon accession | NC_013172 |
Strand | + |
Start bp | 3346344 |
End bp | 3348395 |
Gene Length | 2052 bp |
Protein Length | 683 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644998996 |
Product | short chain dehydrogenase |
Protein accession | YP_003156315 |
Protein GI | 257070060 |
COG category | [S] Function unknown |
COG ID | [COG3347] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR02632] rhamnulose-1-phosphate aldolase/alcohol dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGAGA GGACCGCTGT GAACGAGACC GTCGCCGCCC TGCTGGAGCG CTCGAACGCG CTGGGCTCCG ATCCGCGCAA CACCAACTAC GCCGGCGGCA ACACCTCCGC CAAGGGCTCC GCGACCGACC CCGTGACCGG GGAGGAGACC GAGCTGCTGT GGGTCAAGGG CTCCGGCGGG GACCTCGGCA CGCTCGAGGA GAAGGGCCTG GCGGTGCTGC GCCTGGACCG GGTGCGCGCC CTGCAGGACG TCTACCCGGG CGTCGAGCGC GAGGACGAGA TGGTCGCGGC CTTCGACTAC TGCCTGCACG GCAAGGGCGG GGCCGCCCCC AGCATCGACA CCGCGATGCA CGCCCTGGTC GACGCCGAGC ACGTCGATCA TCTGCATCCC GATGCGGGCA TCGCGCTGGC GACCGCGGCC GACGGGGAGC GCCTGACCCG CGAGTGCTTC GGCGAGGCCG TGGTGTGGGT GCCGTGGCGC CGGCCCGGCT TCCAGCTGGG CCTGGACATC GCGGAGATCA AGCGCGAGAA CCCCGGCGCG ATCGGCTGCA TCCTGGGCGG GCACGGCATC ACCGCCTGGG GCGAGACCTC CCAGGAGGCG CAGGAGAACT CGCTGCGGAT CATCCGTGAG GCGACCGAGT TCATCGAGCG CACCGGCACC CCCGAGCCTT TCGGCGCGCA TGATCCTGCG CGTGCCGCGC TGCCGGAGGC GGAGCGGCGC GCGAAGGCGT CGGCCCTGTT CCCGGTGATC CGGGGCCTGG CCTCGACGGA TACGCCGATG GTCGGGCACT TCACGGACAC CGAGGCGGTG CACGAGTTCC TCGCCTCCGA GAAGCTCTCG ACGCTGGCTG ATCAGGGCAC GTCGTGCCCG GACCACTTCC TGCGCACCAA GGTCAAGCCG CTCGTGCTGG ACCTGCCCGC GGACGCCTCG ATCGAGGACT CCGTGGCGCG GCTCAAGGAG CTGCACGAGT CCTATCGCGC GGACTACACC GCCTACTACG AGCGCCATGC CGATGCCGAC TCCCCCGCCA TGCGCGGCGC GGATCCGGCG ATCGTGCTGA TCCCGGGCGT GGGCATGTTC TCCTTCGGCG CGGATGCGCA GACCGCCCGC GTGGCCGGCG AGTTCTACGT CAACGCGATC AACGTGATGC GCGGCGCGGA GGCGATCTCC ACGTACTCCC CCATCGAGGA GTCGGAGAAG TTCCGCATCG AGTACTGGGC GCTCGAGGAG GCGAAGCTGC AGCGCAAGCC GAAGCCCAAG CCGCTCGCGA CCCGGGTGGC GCTGGTGACC GGCGGCGGCT CCGGCATCGG CAAGGCCACC GCCGAGCGGC TCGTGGCCGA GGGCGCCTGC GTGGTGATCG CGGATCTCAA CCTCGAGGGC GCCGAGGCCA CCGCCGCGGA GCTGGGCGGG CCGGACCGGG CTGTCGCCCT GCGGGCCGAC GTCTCCGATG AGCAGGCCGT GGTCGAGGCG GTGGCCGAGG CGGTGCTCGC CTTCGGGGGC CTCGACCTCA TCGTCAACAA CGCCGGGCTC TCGCTGTCCA AGCCGCTGCT GGAGACCACC GCGAAGGACT GGGACCTGCA GCACGACGTG ATGGCGCGCG GCAGCTTCCT CGTCTCCCGC GAGACGGCCC GGGTGATGAT CGACCAGGCC ATGGGCGGGG ACATCATCTA CATCTCCTCG AAGAACTCCG TGTTCGCCGG CCCCAACAAC ATCGCCTACT CGGCGACGAA GGCCGATCAG GCGCACCAGG TGCGGCTGCT CGCGGCGGAG CTCGGCGAGC ACCAGATCCG CGTCAACGGC ATCAACCCCG ACGGGGTGGT GCGCGGCTCC GGCATCTTCG CCGGCGGCTG GGGCGCCTCG CGCGCGAAGG TGTACGGCGT GGAGGAGGAG AAGCTCGGCG AGTTCTACGC CCAGCGCACC CTGCTGAAGC GCGAGGTGCT TCCCGCGAAC GTCGCGAACG CCGTCTTCGC GCTCACCGCC GGGGACCTCT CGCACACCAC CGGCCTGCAC ATCCCGGTCG ACGCCGGGGT CGCGGCGGCG TTCCTGCGAT GA
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Protein sequence | MSERTAVNET VAALLERSNA LGSDPRNTNY AGGNTSAKGS ATDPVTGEET ELLWVKGSGG DLGTLEEKGL AVLRLDRVRA LQDVYPGVER EDEMVAAFDY CLHGKGGAAP SIDTAMHALV DAEHVDHLHP DAGIALATAA DGERLTRECF GEAVVWVPWR RPGFQLGLDI AEIKRENPGA IGCILGGHGI TAWGETSQEA QENSLRIIRE ATEFIERTGT PEPFGAHDPA RAALPEAERR AKASALFPVI RGLASTDTPM VGHFTDTEAV HEFLASEKLS TLADQGTSCP DHFLRTKVKP LVLDLPADAS IEDSVARLKE LHESYRADYT AYYERHADAD SPAMRGADPA IVLIPGVGMF SFGADAQTAR VAGEFYVNAI NVMRGAEAIS TYSPIEESEK FRIEYWALEE AKLQRKPKPK PLATRVALVT GGGSGIGKAT AERLVAEGAC VVIADLNLEG AEATAAELGG PDRAVALRAD VSDEQAVVEA VAEAVLAFGG LDLIVNNAGL SLSKPLLETT AKDWDLQHDV MARGSFLVSR ETARVMIDQA MGGDIIYISS KNSVFAGPNN IAYSATKADQ AHQVRLLAAE LGEHQIRVNG INPDGVVRGS GIFAGGWGAS RAKVYGVEEE KLGEFYAQRT LLKREVLPAN VANAVFALTA GDLSHTTGLH IPVDAGVAAA FLR
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