| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_29550 |
|---|
| Symbol | |
|---|
| ID | 8401499 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | + |
|---|
| Start bp | 3334947 |
|---|
| End bp | 3336455 |
|---|
| Gene Length | 1509 bp |
|---|
| Protein Length | 502 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644998987 |
|---|
| Product | L-arabinose isomerase |
|---|
| Protein accession | YP_003156306 |
|---|
| Protein GI | 257070051 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2160] L-arabinose isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGACAACC CCTTCACCGC ACGCGAGATC TGGTTCCTGA CCGGCAGCCA GGGCCTGTAC
GGCCCCGAGA CGCTCGTCCA GGTCGCCGAG CAGTCCCGCA CCATCGCCGA GACGCTCGAT
GCCGCGAGCG ACATCCCGGT GAAGATCGTC TGGAAGCCGG TGCTCACCGA CCGTGACGCG
ATCCGCGAGA TCGCCCTGGC CGCGAACGCG GACCCGGCCT GCGTGGGCGT CATCGCCTGG
ATGCACACCT TCTCCCCCGC GAAGATGTGG ATCCAGGGCC TGGATGCGCT GCGCACCCCG
CTGCTGCACC TGCACACCCA GGCGAACGTC GAGCTGCCCT GGTCCACGAT CGACATGGAC
TTCATGAACC TCAACCAGGC CGCGCACGGC GACCGCGAGT TCGGCTACAT CGCCACCCGC
CTGGGCGTGG ACCGCAAGAC CGTCGTGGGC CACGCGAGCG ACGAGGGCGT GCAGTCCAAG
ATCGGCCGCT GGGCCCGCGC CGCGACCGGC TGGGCCGAGA TGCACTCGCT GAAGCTCGCC
CGCTTCGGCG ACAACATGCG GGGCGTCGCC GTCACCGAGG GCGACAAGAC CGAGGCGGAG
CTGCGCCTCG GCGTCTCCGT GAACACCTGG GGCGTCAACG ACCTGGTCAC AGTAGTGGAT
GCGGTCGACG ACCGAGATGT CGATGCGCTG GTCGCCGAGT ACGAGGAGCT CTACGAGGTC
GCCCCCGAGC TGCGGAAGGG CGGGGAGCGC CACGAGTCGC TGCGCTACGG CGCCCGCCAG
GAGATCGGGC TGCGCACCTT CCTCGAGGAG GGCGGCTTCG GCGCCTTCAC CACGAACTTC
GAGGACCTCG GCGGTCTGCG CCAGCTCCCG GGCCTGGCCG TGCAGCGCCT GATGGCCGAC
GGCTACGGCT TCGGCGCCGA GGGCGACTGG AAGACCGCCA TCCTGGTGCG GGTCGCCGCG
GTGATGGGCC ACGGCCTGCC CGGCGGCGCC TCCCTCATGG AGGATTACAC CTACGAGCTC
ACCCCGGGCA GGGAGAAGAT CCTCGGCGCC CACATGCTCG AGGTCTCCCC CTCGCTGACC
ACCCAGAAGC CCACGCTGGA GATCCACCCG CTGGGCATCG GCGACCGCGA GGACCCGGTG
CGGCTGAAGT TCACGGCCGA CCCCGGCCCC GCCGTGGTGG TGGCGCTGAG CGACATGCGC
GAGCGCTTCC GCCTGGTGGC CAACGTGGTC GACGTGGTCG AGCCCGATGA GGAGCTGCCG
AACCTGCCGG TGGCCTGCGC CGTCTGGGAG CCGAAGCCGG ACTTCGCGAC CTCCGCCGAG
TGCTGGCTCA CCGCCGGCGC CGCCCACCAC ACCGTGATGA GCAACGCCGT GGACCTCGAG
ACCTGGGAGG ACCTCGCGAC GATCGGCGAT CTCGAGCTCG CGATCATCGA CGAGGACACC
ACGGTGCGCT CCTTCGCCCA GGACCTGCGC ACCAACCAGG TCTTCCACCG CCTCGCCCAG
GGCTTCTGA
|
|---|
| Protein sequence | MDNPFTAREI WFLTGSQGLY GPETLVQVAE QSRTIAETLD AASDIPVKIV WKPVLTDRDA
IREIALAANA DPACVGVIAW MHTFSPAKMW IQGLDALRTP LLHLHTQANV ELPWSTIDMD
FMNLNQAAHG DREFGYIATR LGVDRKTVVG HASDEGVQSK IGRWARAATG WAEMHSLKLA
RFGDNMRGVA VTEGDKTEAE LRLGVSVNTW GVNDLVTVVD AVDDRDVDAL VAEYEELYEV
APELRKGGER HESLRYGARQ EIGLRTFLEE GGFGAFTTNF EDLGGLRQLP GLAVQRLMAD
GYGFGAEGDW KTAILVRVAA VMGHGLPGGA SLMEDYTYEL TPGREKILGA HMLEVSPSLT
TQKPTLEIHP LGIGDREDPV RLKFTADPGP AVVVALSDMR ERFRLVANVV DVVEPDEELP
NLPVACAVWE PKPDFATSAE CWLTAGAAHH TVMSNAVDLE TWEDLATIGD LELAIIDEDT
TVRSFAQDLR TNQVFHRLAQ GF
|
|---|
| |