| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_29290 |
|---|
| Symbol | |
|---|
| ID | 8401473 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | - |
|---|
| Start bp | 3303795 |
|---|
| End bp | 3305450 |
|---|
| Gene Length | 1656 bp |
|---|
| Protein Length | 551 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644998961 |
|---|
| Product | alpha-L-arabinofuranosidase |
|---|
| Protein accession | YP_003156280 |
|---|
| Protein GI | 257070025 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3534] Alpha-L-arabinofuranosidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.303495 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCGAGA ACCCTGTGAC CGAGTCTTCC CGCTCCCTGA CCTCCGGCCT CGTCTCCGCG
CTGAGCGCGA CGCAGACCGG CTCCCGCGCC TCCGGCTCCA CCGGCCCGTC GGCCGCCCCC
ACCGACGGCC CGGCCCGTGT GGTGATCGAC CTCGACCTGC CCGGCGCCAC CATCAGCCGG
CACCTCTACG GCCATTTCGC CGAGCACCTG GGCCGCTGCA TCTACGGCGG CTTCTACGTG
GGCGAGGACT CCCAGATCCC GAACACGCGC GGCATCCGCG ATGACGTGGT CGAGGCGCTG
CGCGCGCTGC AGATCCCGAA CCTGCGCTGG CCCGGCGGCT GCTTCGCCGA CGACTACCAC
TGGCGCGACG GCATCGGCCC GCGCGAGGAG CGGCCCCGCA TGGTCAACTC CCACTGGGGC
GACATCGTCG AGGACAACTC CTTCGGCACC CACGAGTTCA TGGACCTCGT GGAGCTGCTG
GACACCGAGG CGTACGTCAA CGGGAACGTC GGCTCCGGCA CGGTCGCGGA GATGAGCGAC
TGGATCGAGT ACCTCACCCG CGCCGACGAC TCGCCGATGG CGTCCCTGCG CCGCGCCAAC
GGCCGCGACG AGCCGTGGAC GGTGCCCTAC TTCGGCATCG GCAACGAGGC CTGGGGCTGC
GGCGGCAACA TGCGCGCCGA GGACTACGCG GCGCTGGCCC GCCAGTACTC CACCTATGTG
CGCGACCACG GCGGCAACGA GGTCACCCGC ATCGCCGCCG GCGCCAACAT CGACGACTTC
GGCTGGACCG AGGCGCTCAT GCGGGCCGCC ACGAACCTCG AGGGCCGCGA CGGCAAGGCA
GGCCCCTACC AGGCGATCTC CCTGCACTAC TACACGATGT CCGGGTCCTG GGAGGACAAG
GGCAGCGCCA CCGAGTTCTC CGAGGACGAG TGGTACCTGA CCCTCTCCCG CGCCGCCCGC
GCGGAGGAGC TCGTGGCCCG CCACAGCACC GTCATGGACC ACTACGACCC GCACCGGAAG
GTGGGCCTGG TCTTCGACGA GTGGGGCACC TGGTGGAACG TCGAGCCCGG CACCAACCCC
GGCTTCCTGT ACCAGCAGAA CACCGTGCGC GACGCGCTCG TGGCGAGCAT CCACTTCGAC
GGCTTCCACC GCCACGCCGA CCGGCTGCTC ATGGCGAACA TCGCCCAGAC CGTCAACGTG
CTGCAGGCGA TGATCCTCAC CGATCCGGAC TCCGGCGCGC TCGTGCTCAC CCCCACGTAT
CACGTGTTCG CGATGAACGC CGGGCACCAG GACGCGCGGG CGCTCGACGC CCACGTGCTG
CTGCCCGAGG AGATCGCCGA GGTGGACGGC CGCGCGCTGC CGATGCTCTC CGCCTCCGCC
TCGACCACGG GCGAGACGGC GCTGGTGTCC CTGTCCAACC TCGACCTGGA CCAGGAGCGC
ACGCTCGTGC TCGACCTGCG CGGGCGCGGC GTCACCGGGC ACACGGCGAC GGTGCTCACC
GGCGAGGGCT CCGCCGCGCA CAACACGCCC GAGCAGCCCG AGGCCGTCGC GCCCCGTCCG
CTCGAGAACG TGCGCGAACT CGAGAACGGG GGCGGCCTCG AGATCACCCT GCCGCCGCAC
TCCTTCGCGA CCGTCGAGCT GCAGCTGGGG GAGTGA
|
|---|
| Protein sequence | MTENPVTESS RSLTSGLVSA LSATQTGSRA SGSTGPSAAP TDGPARVVID LDLPGATISR
HLYGHFAEHL GRCIYGGFYV GEDSQIPNTR GIRDDVVEAL RALQIPNLRW PGGCFADDYH
WRDGIGPREE RPRMVNSHWG DIVEDNSFGT HEFMDLVELL DTEAYVNGNV GSGTVAEMSD
WIEYLTRADD SPMASLRRAN GRDEPWTVPY FGIGNEAWGC GGNMRAEDYA ALARQYSTYV
RDHGGNEVTR IAAGANIDDF GWTEALMRAA TNLEGRDGKA GPYQAISLHY YTMSGSWEDK
GSATEFSEDE WYLTLSRAAR AEELVARHST VMDHYDPHRK VGLVFDEWGT WWNVEPGTNP
GFLYQQNTVR DALVASIHFD GFHRHADRLL MANIAQTVNV LQAMILTDPD SGALVLTPTY
HVFAMNAGHQ DARALDAHVL LPEEIAEVDG RALPMLSASA STTGETALVS LSNLDLDQER
TLVLDLRGRG VTGHTATVLT GEGSAAHNTP EQPEAVAPRP LENVRELENG GGLEITLPPH
SFATVELQLG E
|
|---|
| |