| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_28840 |
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| Symbol | |
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| ID | 8401428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Brachybacterium faecium DSM 4810 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013172 |
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| Strand | - |
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| Start bp | 3247635 |
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| End bp | 3249386 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 644998916 |
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| Product | haloacid dehalogenase superfamily enzyme, subfamily IA |
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| Protein accession | YP_003156236 |
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| Protein GI | 257069981 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.107829 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCACTG CGCCTCGCAG CCCCCTTCCG GCCGACACCC TCCCCGGGCC CCGGCTCGTG
CCGGCCCCCG CCGCCCCGTC GTCGGAGACC CCCGCGCCGG CCCTGCCCGC GCCGCGCGCC
CTGCTGCTGG ACTTCGGCGG GGTGGTCATC TCGACCGCGG CCCGCGTGAG CTGGGCCCGC
GAGCTCGCCG AGATCGTGGT GGACCGCGCC CGGCCCCTCG GGGCACAGCT GGACCTCGCC
GCGGTCGAGG AATCGCTGCG CGCCGGACGC ACCGCCCTGT CGCTGTGGAA GAACGCCGCC
AGCCGCCGCC TCGCCCCGCG CGAGCTGAGC CCGCGCGAGA TCGTCGAGGA CTTCCTGCTC
GCGGATCTGC CGACGGCGGC GCGCAAGGGC CTCGCCCTGG ACGCCCCGGA GCTGCTCGCG
GCGATGGCGC CCCTGGTCGC CGACCATCAC CTCCGCCCCG GCATCCCCGA GCTGCTCGCC
GAGTGCACCG CACGGGGCAT CCGCCTGGGC ATCGTCTCCA ACGCCCACTC CGGCCGCGCG
CACCGCACGA TCCTCGACTA CCTCGGCCTC GGGGACGCCT TCGGGGTGCA GATCTACTCC
GACGAGGTGG GCATCCGCAA ACCGCACCCG GGCATGATCC ACCTGGCCAC CGAGGCGCTC
GGCGTGCAGC CCGCCGAAGC CTGGTACGTG GGCGACACCC TCGACCGCGA CGTCGTCGCC
GGGCGGCGCG CCGCGGTGGG CGCCGTCGTG ATCACCCGCG ACCGCCGCAC CGACCACCCG
CCCTTCTCCG TCGCCGAGAC GCCCGACCTG GTGCTCGACA CCCCCGAGGG GCTGCTCGAC
CCGCTGCGCG CCGCGCTCGC CGGAGCCGAC AGCGCGACCG CGGCCGACGA CGCCACCACC
GCCACCATCA CCACCGCCCC CAACGCCGCC GACGCTGCGG CCGGCGCCCC GTCGGCCGCC
CCCGCGCGCC GTGCCCTGCT GCTCGACCAC GGCGGGGTCA TCACCTGGTC CACGGCGAAC
CCCGACCGGT TCCGCGAGAT CGGGGCCCGC ATCGTCGCGC TGTCCGCACG GATCGGCAGC
CCGATCGACC AGGCCGCTGC GGAACGTGCC GTCGAGGCCG GATGGGACCG GCACCGCGCC
CGCAAACGCG CCCGCGACGC CTCCGCCGAC CCCGTCGCCC GGCACGAGGA GATCGACCCC
GCCGCCCTGT GGGGCGATCT CGTCGGCGAG GGGCTGCCCG AACCGCTGCG CGCGGCGCTG
CGCCTCGAGG CACCGCAGCT CTCCTTCGCC CTGCACCGGG CCAAGAGCGT GCCCGCGCCG
CGCCCCGGAG CGCTCGAGCT GATCCGCTGG TGCCACGAGA ACGACATCGT CGTCGGGATC
GTCTCGAACA CCATCTCCGG CCGCGGGGTG CGGGAGATCC TCACCCGCTA CGGCGTGGGA
TCGCTGCTCG GCCCCTCCGC CTACTCCGAC GAGATCGGGG TGCGCAAGCC GGGCCGCGCG
ATCTTCGAGG CCGCGCTCGC CGGCCTGGAC GTGGACCGGG CCGACGTCGT CTACGTGGGC
GACAAGTCCC TCAACGACGG CGCGGGCGGG CGCGAGGCCG GCATCGGCAC CGTCTGCCTG
CTGCGCGGAG GCAAGGACGA CGAGGAGCAG CTCGCCGCCG CCCTCGCCGC GGGCGACGCC
CACCACGTGC TCGACTCCCC GGCCGACGTG ATCGACCTGC TCGCCGCGCC CCACCCGGCG
CCCCCGGCCT GA
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| Protein sequence | MTTAPRSPLP ADTLPGPRLV PAPAAPSSET PAPALPAPRA LLLDFGGVVI STAARVSWAR
ELAEIVVDRA RPLGAQLDLA AVEESLRAGR TALSLWKNAA SRRLAPRELS PREIVEDFLL
ADLPTAARKG LALDAPELLA AMAPLVADHH LRPGIPELLA ECTARGIRLG IVSNAHSGRA
HRTILDYLGL GDAFGVQIYS DEVGIRKPHP GMIHLATEAL GVQPAEAWYV GDTLDRDVVA
GRRAAVGAVV ITRDRRTDHP PFSVAETPDL VLDTPEGLLD PLRAALAGAD SATAADDATT
ATITTAPNAA DAAAGAPSAA PARRALLLDH GGVITWSTAN PDRFREIGAR IVALSARIGS
PIDQAAAERA VEAGWDRHRA RKRARDASAD PVARHEEIDP AALWGDLVGE GLPEPLRAAL
RLEAPQLSFA LHRAKSVPAP RPGALELIRW CHENDIVVGI VSNTISGRGV REILTRYGVG
SLLGPSAYSD EIGVRKPGRA IFEAALAGLD VDRADVVYVG DKSLNDGAGG REAGIGTVCL
LRGGKDDEEQ LAAALAAGDA HHVLDSPADV IDLLAAPHPA PPA
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