Gene Bfae_28210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_28210 
Symbol 
ID8401365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp3164557 
End bp3165960 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content70% 
IMG OID644998856 
Productdrug resistance transporter, EmrB/QacA subfamily 
Protein accessionYP_003156176 
Protein GI257069921 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCCAGA GCACGGCCGC GCCACCGGCG GCACCCGCGC AACCTTCCGG CAAGCTGCTC 
GCGGCGATCA TCGTCGGAGG GGTGACGGCG ATCCTCGACA CGACGATCGT CGCGATCGGC
CTGCAGACGC TGACGCACCA GCTCCATGCG TCCGTCGCGA CGATCCAGTG GGTGAGCACC
GGATATCTGC TCGCCCTCGC CGTGGCGATC CCGTTCGTGA GCTGGGCCCA GGCACGATTC
GGCGGGAAGC GGGTGTGGCT CTTCGCGCTG TCCCTGTTCG TGCTGGGCTC GATCCTCTGC
GCGTGTGCAT GGGATGCGCC GTCCCTCATC GCCTTCCGAG TCGTGCAGGG GCTCGGCGGC
GGCATCATGT TCCCGCTCAT GCAGACCCTC GCCATGCAGA ACGTCGCACC CGAGAACCGC
ACCCGCACCA TGGCGACGGT CGGCATCCCG GCTGCGCTCG GGCCGATCCT GGGGCCGGTG
CTCGGCGGCC TCGTGCTGGA ATGGCTCGAC TGGCGCTGGC TGTTCCTCAT CAACGTGCCG
CTCGGGATCG TGGGGCTCGT GCTCGCGATG AAGTTCATCG CCGACGACCG GCCCCTCCCA
GGCTGCCCGC GTCCCCGCGT GGACGCGGTC GGGATCGTGT TGCTCGCCCC GGCGCTCGCC
GGCCTCCTGT ACGGGCTCTC CAACGCACAC GCCGAGGGAG GCTTCGGCCG GATGGATGTG
CTCGTCCCCG CCATCACCGG AGCGCTGCTG CTCGTGGGCT TCACGGTGTG GGCAGTTCGA
CGCGCAGGCA CGGCGCTCGT CGATGTGCGG CTCCTGGCCG TGCGCTCGGT GCGCTCATCG
GCGATCGCGC TGACCTTCCT CGGTGCCGCG CTGTTCGCCG GCACATTCTT GTTGCCGCTC
TACTTCCAGA TCTCGCGCGG CGACGGGGTG CTCGACGCCG CACTGCTGCT CATCCCGCAA
GGGGTGGGAT CGCTGCTCGC GCGCCTCCTC GCCAGCCCGA TCGTCGAGCG TTTCGGAGCG
CGCGCCGTCG CGGCTGCTGG CTTCGTGCTC TCCGCGATCG CCACGGTGCC GTTCGCGCTC
GCCGGTGCTG AGACGTCGCT CTGGCTGCTC GGCGCCGCGC TCTTCGTGCG CGGGCTCTGC
CTCGGCGTCG TCATGATCCC GGTCATGACG ACCGCCTATA TCGACATCGA CCGTCAGGAG
GTGCCGCACG CCTCGGCGAT CACCCGCATC GTGCAGCAGC TCGGCGGTGC TTTCGGCACC
GCGCTCGTCG CCGTCGTGCT CACCGCAGCG GCGACTGCGA GCGATCCGGC CACAGGGTTC
GGCCCGGCGT TCTGGACCGT GATCGCGATG AGCGCGGCTG CCGCGGCAGC CGCACTGCCT
CTGCCGGGAA GGAAGCGTTC ATGA
 
Protein sequence
MTQSTAAPPA APAQPSGKLL AAIIVGGVTA ILDTTIVAIG LQTLTHQLHA SVATIQWVST 
GYLLALAVAI PFVSWAQARF GGKRVWLFAL SLFVLGSILC ACAWDAPSLI AFRVVQGLGG
GIMFPLMQTL AMQNVAPENR TRTMATVGIP AALGPILGPV LGGLVLEWLD WRWLFLINVP
LGIVGLVLAM KFIADDRPLP GCPRPRVDAV GIVLLAPALA GLLYGLSNAH AEGGFGRMDV
LVPAITGALL LVGFTVWAVR RAGTALVDVR LLAVRSVRSS AIALTFLGAA LFAGTFLLPL
YFQISRGDGV LDAALLLIPQ GVGSLLARLL ASPIVERFGA RAVAAAGFVL SAIATVPFAL
AGAETSLWLL GAALFVRGLC LGVVMIPVMT TAYIDIDRQE VPHASAITRI VQQLGGAFGT
ALVAVVLTAA ATASDPATGF GPAFWTVIAM SAAAAAAALP LPGRKRS