Gene Bfae_28190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_28190 
Symbol 
ID8401363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand+ 
Start bp3162850 
End bp3163887 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content70% 
IMG OID644998854 
Producttheronine dehydrogenase-like Zn-dependent dehydrogenase 
Protein accessionYP_003156174 
Protein GI257069919 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID[TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCGG CACTCCCGAA GGCTCCGGAG GCCACCATGA GGGTGTCAGC CCTGCACGGC 
GTCGGCGACC TCCGCCTCAC CGAACGCCCC GTGCCCGTCC CTGGGCGCGG CGAGGTGCTG 
GTGCGCGTCG CCGCGGTGGG CGTCTGCGGC AGCGACACGC ACTACTACAC CCAGGGCCGC 
ATCGGACCGT TCGTGGTGGA TCGGCCGCTC GTCCTCGGGC ATGAGGCATC CGGCCGCATC 
GTCGGCGTCG GAGAGGCGGT CGATCCGCGC CGCATAGGTT CGCGCGTCTC GATCGAACCC 
CAGCGGCCAT GCCGCAGCTG CACCGAATGC AAGGCGGGGA GGTACAACCT CTGCCCGCAC 
ATGGAGTTCT TCGCGACCCC GCCCATCGAT GGCGCCTTCG CGGAGATGGT GGTCATCGAG 
GACGACTTCG CCCATGACGT CCCCGACTCC ATCAGCGATG CCGCAGCGGC TCTCGTCGAA 
CCGCTCTCGG TCGGCATCTG GGCATGCCAG AAGGCATGTA TCGGCGCCGG CTCTCGGGTG 
CTGATCGCCG GTGCAGGGCC GGTGGGCATC ATCATCGCGC AGGTTGCTGG AGCATTCGGG 
GCTTCCGAGG TGCACATCAG CGACCTCTCC GACGAGCGGC TCGGCTTCGC TCGGGCACAC 
GGTGCCACGC ACACCCACCG CGCCGATTCC CCTGTCGATG ACCTCGGCGT CGACGCATTC 
ATCGATGCGT CGGGGGCCGA GCCCGCGATC CGGGCGGGCA TCTCGGCCGT CCGGCCCGCT 
GGGTCGGTCG TGCTCGTCGG GCTCGGCGCG GATGAGGCGG TGCTGCCGGT CAACCTGCTC 
CAGAACCGCG AGCTGGTGCT CACCGGCGTC TTCCGCTACG CCAACACGTG GCCGCTCGCG 
ATCCGTCTGC TGGCGGAGGG GCGAATCGAC CTGGACTGCC TGGTGACGGG GCGGCACGGG 
CTCGCCGACG CCGAATCCGC GCTCACCTCG GGCTCCACAC CGCGAAGCAT GAAGTCGCTG 
GTCATGCCGC AGCTCTGA
 
Protein sequence
MSAALPKAPE ATMRVSALHG VGDLRLTERP VPVPGRGEVL VRVAAVGVCG SDTHYYTQGR 
IGPFVVDRPL VLGHEASGRI VGVGEAVDPR RIGSRVSIEP QRPCRSCTEC KAGRYNLCPH 
MEFFATPPID GAFAEMVVIE DDFAHDVPDS ISDAAAALVE PLSVGIWACQ KACIGAGSRV 
LIAGAGPVGI IIAQVAGAFG ASEVHISDLS DERLGFARAH GATHTHRADS PVDDLGVDAF 
IDASGAEPAI RAGISAVRPA GSVVLVGLGA DEAVLPVNLL QNRELVLTGV FRYANTWPLA 
IRLLAEGRID LDCLVTGRHG LADAESALTS GSTPRSMKSL VMPQL