| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_27280 |
|---|
| Symbol | |
|---|
| ID | 8401273 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | + |
|---|
| Start bp | 3049578 |
|---|
| End bp | 3050273 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644998769 |
|---|
| Product | glycopeptide antibiotics resistance protein |
|---|
| Protein accession | YP_003156089 |
|---|
| Protein GI | 257069834 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG4767] Glycopeptide antibiotics resistance protein |
|---|
| TIGRFAM ID | [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0585344 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACGAGC TGCTGCGGCT GGCCCTGGTG GGCATCGCGG GCGGGCTCGG CGTGTTCGCC
GTGCTCCTGC TGCCCGCGAT GTGGCTGCAG CGACGCCGTT TCGGGGCGGT GCGCCCGCCG
CGGCTGCTGG GGGTGGCCGC GATCAGCGTG TACACGATGA CGCTCGCGGG GCTGACGATC
GCCCCCGCCT ACGACGTGGC GGTGACCTGC CGCTCCCGGG TGGGCGGGGT GGCGCGCCTG
GATCCCTTCC ACAGCGCCGC CGAGCTGCTG GCCCTGCAGC GCGGCGGGGC GGGCTGGTGG
GAGATGGCCA CCAGCTTCCC GGTGCTGCAG GTGCTCATGA ACATGGCGCT GTTCGTGCCG
CTGGGGATGA TCCTGCGCGG GGTGTTCCGG CTGGATGCGA CCGCGTCGGT GGCGACGGGG
ATGCTGCTCT CGGCGCTGAT CGAGGTCACC CAGTACACGG GCGCGTTCGG GCTGTACCCG
TGCGGGGTGC GGATCGCGGA CATCGAGGAC CTCGTCGCGA ACACGCTCGG CGGGTGGGCG
GGGGTGCTGT GCGCGCCGCT CGCGACCCGG CTCGGGGTGC CGCTGTTCGT GCACGAGCAG
CCCCTGGACC GTGCCGCTGA GTCTCGTGAT GCCCCTGAGC CTCGTGACGC CCCTGATGCC
GCGGACGACG CCGACGACGC CGACGACGCT CCGTGA
|
|---|
| Protein sequence | MNELLRLALV GIAGGLGVFA VLLLPAMWLQ RRRFGAVRPP RLLGVAAISV YTMTLAGLTI
APAYDVAVTC RSRVGGVARL DPFHSAAELL ALQRGGAGWW EMATSFPVLQ VLMNMALFVP
LGMILRGVFR LDATASVATG MLLSALIEVT QYTGAFGLYP CGVRIADIED LVANTLGGWA
GVLCAPLATR LGVPLFVHEQ PLDRAAESRD APEPRDAPDA ADDADDADDA P
|
|---|
| |