| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_26480 |
|---|
| Symbol | |
|---|
| ID | 8401193 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | - |
|---|
| Start bp | 2951337 |
|---|
| End bp | 2953355 |
|---|
| Gene Length | 2019 bp |
|---|
| Protein Length | 672 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644998689 |
|---|
| Product | glycosyl transferase |
|---|
| Protein accession | YP_003156011 |
|---|
| Protein GI | 257069756 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGTCA GAGTCTCCGT GATCATCCCG GTGTACAACT CCGTCAACTA CGTCGGGGAG
GCGATCCGCT CCGTCCAGGA GCAGTCCCTC GACCGCGACG CGATCGAGAT CCTCGCCGTC
GACGACGGCT CCACGGACGG CGGCGGTGAG CTCCTCGCCG AGATGGCGGC GGAGGATCCC
CGCATCCGCC TGCTCACCCA GGAGAACTCC GGCACGCCCG GAGGGGCGCG CAATCCCGCG
ATCGACATCG CACGGGGAGA GTTCGTCTTC TTCCTCGACT CCGACGACAC GCTCACCCCC
GACGCGCTGC GCGACATGCT CCGCATGGCG GACGCCGAGG ACTCCGACGT GGTGCTCGGC
AAGCTCGGGA GCCTCGATGC CCGGGCCGCG CCGGCGAGCA TGTTCAAGCG CACCGTGGCC
GCCGCGGATC TCGTCGAGGA CAACATCTTC AACACGCTGC GCCCCTCGAA GCTGATCCGC
CGGTCCCTGA TCGACGAGCT GGAGCTGCGC TTCCCCACGG ATCAGAAGGT CGGCGAGGAC
CAGCCGTTCA TGGCCGCCGC CTATCTGAAC GCCCGGAAGG TGTCCATCCT CGCCGACCAC
GACTACTACA TGATCCGCCG GCGCGACGAC GGCACGAACA TGACCAGCAT CGCGCAGACG
GCCGAGGACC AGCTGCGCAC GGCCGTGCGC CTCTCCCGGG CGATCGAGAG GTACACCGAG
CCGGGCGAGC TCCGCGACAA GCTCCTGCGC CGCCCCTTCC AGTGGACGAT GGGGCGGGCC
CTGGACCGTC GCTGGCACCG CCTGCCCCGC GCCGAGCAGG AAGCGCTGCG CGACGAGTTC
CACGCCGAGA TCCGCCACCT CTACACCGAC GGCGTGCGCG AGCCCCTGCC CGAGACCCTC
CGGTGGAAGC TCGATCTGCT CGCCGCCGAC GATCTCGACG GGCTCGCAAT GCTCTTCGAG
CATCTCGGGA CGACGGGCAC ACCCGCCGTC CTCTGGCGCG ACGGGATGTT CCAGCACGCG
CTCCCCGAGG ATCTCGAGCG ACGGCTCCCG AAGCTCTCGC GGCAGGCGGC CGAGCCCGTG
ATGTCCCCGT GCCTCGAGGA CCTCCGCATC GACGGGCTCA CGGTCCGGGT CTCGGCGACG
GTGACCATCC CGGCGCTCGA GGGGGCGCCC GACGGTCTCG GCATCCGAGG GCGTCGCAGG
GACTCCGAGG AGGTCGCCGG CTTCGAGGTC ACGGGTTCGG ACCTCCGCTC GGACGTCTCG
AGCTTCTCCG TCGAGGCCGA GCATGCGGGC CTCAGCCGCG GGGTGTGGGA CCTGTTCGTC
GTGGTGCGCT TCGGGGAGCA CGAGAAGGAG ATCCGCCTCG GTGCGACGCG CTCTGCGGCC
CTCGCCCCGG AGGGGGTCAG CAACCTCGCC GAGGAGCCCT CGGCGGGGGA CAGGCTCATC
GCGTACTTCA CCAAGGGGCC GGGCAACCTC TCCATCGACC GCGGCGGACT GATCGCCCGG
CACACCACGG CGGTCCGCAG CCTGGGGCTC ACCTTCGACG AGAACGGCAG GGCGCTCCTG
CTCATCGAGA CGCCGGCGCC TCCGCAGGAG GCGGACGAGT TCTTCTGCAC CCTCAAGGGC
ATCCCCCAGC ACGGCGGCAG ACAGCTGCTG CCGACCCTCC GGCTCGGCGA GCGGCTGCTC
GGCCTGCGTC TTCCCGTGAC GGCGACGATG ATCGGCGCGA GGCTGAGCAT CGCGTCCGTG
CTCGGCGGCG TCCGTTCCCC TGTCGCGGTC ACCGGCACGG AGTTCTGGCC CGCGCGCGCG
GCGGGCTTCG GTCTCGTCGC CGAGGACGGC GGCGGTGTGC GGGTCGTGGG CGTGCAGGAG
AGCACGCGGC GCCACGGCAG GGTCACCCAC CGCCCCGCGA GGGCCCCGCG CCGCGCGGGC
ACCGGGCGTG CCCGGCTGGC CGCGGCCGTC AGATCGGTCC CGGTCGCTGG CCCGGCTCTC
ACCGGCGCGG TGCGTCGAGC GAGGAACCGG CTGTCATGA
|
|---|
| Protein sequence | MAVRVSVIIP VYNSVNYVGE AIRSVQEQSL DRDAIEILAV DDGSTDGGGE LLAEMAAEDP
RIRLLTQENS GTPGGARNPA IDIARGEFVF FLDSDDTLTP DALRDMLRMA DAEDSDVVLG
KLGSLDARAA PASMFKRTVA AADLVEDNIF NTLRPSKLIR RSLIDELELR FPTDQKVGED
QPFMAAAYLN ARKVSILADH DYYMIRRRDD GTNMTSIAQT AEDQLRTAVR LSRAIERYTE
PGELRDKLLR RPFQWTMGRA LDRRWHRLPR AEQEALRDEF HAEIRHLYTD GVREPLPETL
RWKLDLLAAD DLDGLAMLFE HLGTTGTPAV LWRDGMFQHA LPEDLERRLP KLSRQAAEPV
MSPCLEDLRI DGLTVRVSAT VTIPALEGAP DGLGIRGRRR DSEEVAGFEV TGSDLRSDVS
SFSVEAEHAG LSRGVWDLFV VVRFGEHEKE IRLGATRSAA LAPEGVSNLA EEPSAGDRLI
AYFTKGPGNL SIDRGGLIAR HTTAVRSLGL TFDENGRALL LIETPAPPQE ADEFFCTLKG
IPQHGGRQLL PTLRLGERLL GLRLPVTATM IGARLSIASV LGGVRSPVAV TGTEFWPARA
AGFGLVAEDG GGVRVVGVQE STRRHGRVTH RPARAPRRAG TGRARLAAAV RSVPVAGPAL
TGAVRRARNR LS
|
|---|
| |