Gene Bfae_26310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_26310 
Symbol 
ID8401176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp2926717 
End bp2927835 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content73% 
IMG OID644998673 
Productcell wall-associated hydrolase, invasion-associated protein 
Protein accessionYP_003155995 
Protein GI257069740 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCCGCA CATCTTCACG AGGCACGCAC CGGGCTCCCG GCCGTGCCGT GATCGATTAC 
CGAGGGCTCA CCGCCCCGGT GGGTCGGGGT GTCGGAGGCG CCGCCGTCAT CGGCGCCGTC
TCCGCGACCG CCGCACTCGC CGGAGGGGCC TCGGCCACCG CCCAGGCGCC TGCCGCCTCG
GCCGTCGGAG CCGTCCGCGG CGTCGCCCCG AGCGCCGCCC CCGGCACCAT CCCGAGCGTC
GCTCCGAGCG CCGCCCCGGC CTCCAAGTCC CAGTACACGT CCGTCAAGCT GCGCCTCGGG
GCGCGGGGCG CGGCCGTGAC CTACCTCCAG CAGCGCCTGA ATGCCCACGG CGCCTCGCTG
AAGGTCGACG GCGTCTTCGG CTCCGCGACC CTGCGGGCCG TGAAGAACCG TCAGTCCAGC
GCCCGCATCG GCGTGGACGG CGTGGTGGGC CCGAAGACCT GGAACGCGCT GACCGGTTCC
TCCTCCTCGG CCCCCTCCAC CGGGTCGCAG CCGAAGCTGC GCCAGGGCAA TCGCGGCTCC
GCCGTGACCA CCCTGCAGAA GCAGCTCAAC AGCGCCGGCG CCTCGCTGAC GGTCGACGGG
GTCTTCGGCT CCGCCACCGG CTCGGCGGTG CGTGCCCTGC AGTCCGCGGC CGGCATCGGC
GTGGACACCG TGGTCGGCCC GAAGACGTGG AACGCGCTGA ACAGCGGCGT GCGCATCTCC
GGTGGTGGCG GCGGCGGGGC CAGCGCCCCC AGCACCGGCA GCAACCTCAA CGGGCAGGCC
GCCATCAACG CGGCGCGCTC GCAGCTGGGT GTCCGCTACA AGTGGGGCGG CTCCACGCCC
TCGAGCGGCT TCGACTGCTC GGGGCTGGTG TACTACGCGT ACAACCAGGC GGGCATGAAC
CTGCCCCGCA AGACGGCGAA GGGCTACACC TTCGGCGGCC GGATCATCTC GAAGTCGCAG
GCGCAGCCCG GCGACCTCGT CGCCTTCACC GGCAACGACT ACGGCCACAT GGGCATCTAT
GTGGGCAACG GCAAGATCAT CGACGCCTCC GGCTCGCGCC AGCAGGTCGT CGAGCGCTCC
ATCTGGAACG CACCGCACGT GTTCGTCACC TACCGCTGA
 
Protein sequence
MFRTSSRGTH RAPGRAVIDY RGLTAPVGRG VGGAAVIGAV SATAALAGGA SATAQAPAAS 
AVGAVRGVAP SAAPGTIPSV APSAAPASKS QYTSVKLRLG ARGAAVTYLQ QRLNAHGASL
KVDGVFGSAT LRAVKNRQSS ARIGVDGVVG PKTWNALTGS SSSAPSTGSQ PKLRQGNRGS
AVTTLQKQLN SAGASLTVDG VFGSATGSAV RALQSAAGIG VDTVVGPKTW NALNSGVRIS
GGGGGGASAP STGSNLNGQA AINAARSQLG VRYKWGGSTP SSGFDCSGLV YYAYNQAGMN
LPRKTAKGYT FGGRIISKSQ AQPGDLVAFT GNDYGHMGIY VGNGKIIDAS GSRQQVVERS
IWNAPHVFVT YR