| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_25770 |
|---|
| Symbol | |
|---|
| ID | 8401122 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | + |
|---|
| Start bp | 2873925 |
|---|
| End bp | 2874863 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644998625 |
|---|
| Product | predicted metalloprotease |
|---|
| Protein accession | YP_003155948 |
|---|
| Protein GI | 257069693 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2321] Predicted metalloprotease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGTTCA CCCCGGGCGC CGAGATCCGA TCCGACAACG TCTCCGCCGC GGGCGGTGGG
GGCGGATTCC GGCCGCCCGG CCGCGGGCGC GGTGGGGGTC GTGGTGGGGG TCGCGGGCTG
AAGCTCGGCG GCGGCGGGGG CTGTGTGCTG CTGGTGATCG TGGTGATCTA TGCGCTGATG
GGCGGCAACC CGCTCGATCT CCTGGACGGC GGGGGCGGCT CGCGGGGTCC GGTGGCGGAG
GGCGGCTCGC TGGACCACTG CCTCACCGGC GCGGACGCGA ACGAGCAGGA CGACTGCCTG
GTGCAGGCCA CGATCGAGTC GGAGGACTCG CTGTGGTCGC AGCTGGGGCC CGAGGCCGGG
GTGGAGTTCG TCGAGCCGCA GGGCCGGGTG TTCACCAGCA CGGTCCAGAC GGGCTGCGGC
GCGGCCACGG CGGACGTCGG CCCGTTCTAC TGCCCCGCCG ATTCGACGAT CTACGTGGAC
ATCGCCATCT TCGACTCGCT CTCGGGCCGG TACGGGGCCG ACGGCGGGCA GCTGGCGAAG
ATGTATGTGG TCGCCCACGA GTACGGCCAC CACATCCAGC ACCTCTCCGG GACGATGCAG
GAGGCGGATC GCTCGCAGAC GGGCCCGCAG TCAGGGGCGG TGCGGCTCGA GCTGCAGGCC
GACTGCTACG CCGGGGTGTG GGCGCATCAC GCGGCGAACA CGGTGGACGA TGCGGGCAAC
GCGATGCTGT CCCCGCTCAC CGAGGAGGAC ATCGAGTCGG CGCTCTCGGC GGCGAACGCG
GTGGGCGATG ACCACATCCA GGGCGAGGTC GCCGGCGGCG AGGTGCGCCC GGAGTCCTGG
ACCCACGGCT CCTCCGAGCA GCGCCGCGCC TGGTTCACCA CCGGCTACGA GCAGGGCACG
GTGCCCTCCT GCGACACCTT CGCCGTCGAC CAGGTCTGA
|
|---|
| Protein sequence | MTFTPGAEIR SDNVSAAGGG GGFRPPGRGR GGGRGGGRGL KLGGGGGCVL LVIVVIYALM
GGNPLDLLDG GGGSRGPVAE GGSLDHCLTG ADANEQDDCL VQATIESEDS LWSQLGPEAG
VEFVEPQGRV FTSTVQTGCG AATADVGPFY CPADSTIYVD IAIFDSLSGR YGADGGQLAK
MYVVAHEYGH HIQHLSGTMQ EADRSQTGPQ SGAVRLELQA DCYAGVWAHH AANTVDDAGN
AMLSPLTEED IESALSAANA VGDDHIQGEV AGGEVRPESW THGSSEQRRA WFTTGYEQGT
VPSCDTFAVD QV
|
|---|
| |