Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bfae_25520 |
Symbol | |
ID | 8401097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brachybacterium faecium DSM 4810 |
Kingdom | Bacteria |
Replicon accession | NC_013172 |
Strand | + |
Start bp | 2850238 |
End bp | 2852166 |
Gene Length | 1929 bp |
Protein Length | 642 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644998600 |
Product | glycosidase |
Protein accession | YP_003155923 |
Protein GI | 257069668 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.563974 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTCGTC TCCAGGCCGA CGTCGCCGCT GATCTCCCCC GCCTGCGCGC CCAGCTCGCC GCCCGCCCCG TGCCGCCCGA GCCGGAGCTC GCCGCCCGCA TCGAGGAGCA CCTGCCCACC CTGCACGGCC TGTTCGTGCA GCTGTACGGG GACCGGGACG ACTCCTTCGA CGCCCTCGCC GCGGTGATGG AGCTGGTGGT CGACTCCTGG CAGCGACGGC CCGCGGCGCT GCGCGCCCTG GACGCGCGCC GCACCGCCGA CCCGACCTGG TTCGAGTCCC CCACCATGCT GGGCGGGGTC TGCTACGTGG ACCGCTACGC CGGTTCGCTG CGCGCCCTGC ACGAGCACAT CGGCTACTTC CAGGAGCTGG GGCTGACGTA CCTGCACCTG ATGCCCCTGT TCGACTCCCC CGCGGGCAAG GACGACGGCG GCTACGCGGT GAGCAGCTAC CGGAGGGTGC GCGAGGGGCT GGGCACGATG GAGGAGCTCG CCGAGCTGGC CGCCGCCCTG CGCGAGGCCG GGATCTCCCT CGTGCTGGAC TTCATCTTCA ACCACACCAG CGACGAGCAC GACTGGGCGC GGCGCGCCGT CGCAGGGGAT CCGGAGTTCG AGGATTTCTA CCTGATCTTC GAGGACCGCA CCCTGCCCGA CGCCTACGAG CGCACCACCC GCGAGATCTT CCCCGACGAC CATCCCGGCT CCTTCGTGCA GCTGGGCGAC GGGCGCTGGA TCTGGTCGAC CTTCTACCAC TTCCAGTGGG ACCTGAACTA TGCGAACCCC GCGGTGTTCC GGGCGATGGC CGGGGAGATG CTGTTCCTCG CCGCGCAGGG CGTCGAGGTG CTGCGGATGG ATGCGGTCGC CTTCATCTGG AAACGGCTGG GCACGCCCTG CGAATCGCTG CCGGAGGCGC ATCTGCTGCT GCGGGCCTTC AACGCGGTGC TGCGCATGGC CGCGCCCGGG GTGCTGTTCA AGTCCGAGGC GATCGTCCAC CCCGACGAGG TGATCGAGTA CATCGATCCG CTCGAGTGCC AGCTCTCCTA CAACCCGCTG CAGATGGCGC TGACCTGGGA GGCGCTGGCC ACGCGGGATG CTCGGCTGCT GTCCCAGGCG CTCGCGCGGC GCCACGCCCT GCCGGAGGGG ACCGCGTGGG TGAACTACGT GCGCTCGCAC GACGACATCG GCTGGACCTT CGCGGACGAG GACGCCGCCG AGCTCGGCAT CGACGGCTTC GCCCATCGCC GGTTCCTCAA CGACTTCTAC ACCGGCCGCT TCCCCGGCAG CTTCGCCCGC GGCGCCGCCT TCCAGGAGAA CCCCCGCACC GGGGACGCAC GGGTGGCCGG CACCACGGCG GCCCTCGCGG GTGTGGAGAC CGCCGACGCC GGCGGCGAGG ACCGGGTGCT GCTCGCCCAC GCCCTCGCGC TGTCCACGGG CGGCGTGCCG CTGCTGTACC TGGGCGACGA GGTGGGCCAG TTCAACGACC ACGACCACCG CAACCGCCCC GCGGAGGCCG ACGACAGCCG TTGGGTGGGC CGGCCGATGC GCCCCGCCCA GGCCTATGCG GCCCGGCGGG ACCCCCGCAC CGTGGCCGGG CGGATCCACG CCCGGCTGCG CCGGATGATC GCCGTGCGGC AGCAGACCCC CGAGCTGGGC GGGACCACGC TGCTGCCCTT CGACGTGCCG CATCCGGCGG TGCTCGGCTA CCAGCGGCCC GGCCTCGAGG AGCGGGCCGA CGCGATCCCG CGGGCGCGGG TGCTGGTGCT CGCCAACGTC GGCGACCATC CCGCCCGCGT GCCCGCGGTG ACGCTCTCCG GGTTCGAGAC CGCCGCCCAC GAGCTGCTGG CCGACGAGGC GGTGGACCTC GCCGACGGGC TCTCCCTGCC CGCCCACGGT GTGCTCTGGC TGAGGGTGAC GCCGCGCCCC GCAGGGTGA
|
Protein sequence | MSRLQADVAA DLPRLRAQLA ARPVPPEPEL AARIEEHLPT LHGLFVQLYG DRDDSFDALA AVMELVVDSW QRRPAALRAL DARRTADPTW FESPTMLGGV CYVDRYAGSL RALHEHIGYF QELGLTYLHL MPLFDSPAGK DDGGYAVSSY RRVREGLGTM EELAELAAAL REAGISLVLD FIFNHTSDEH DWARRAVAGD PEFEDFYLIF EDRTLPDAYE RTTREIFPDD HPGSFVQLGD GRWIWSTFYH FQWDLNYANP AVFRAMAGEM LFLAAQGVEV LRMDAVAFIW KRLGTPCESL PEAHLLLRAF NAVLRMAAPG VLFKSEAIVH PDEVIEYIDP LECQLSYNPL QMALTWEALA TRDARLLSQA LARRHALPEG TAWVNYVRSH DDIGWTFADE DAAELGIDGF AHRRFLNDFY TGRFPGSFAR GAAFQENPRT GDARVAGTTA ALAGVETADA GGEDRVLLAH ALALSTGGVP LLYLGDEVGQ FNDHDHRNRP AEADDSRWVG RPMRPAQAYA ARRDPRTVAG RIHARLRRMI AVRQQTPELG GTTLLPFDVP HPAVLGYQRP GLEERADAIP RARVLVLANV GDHPARVPAV TLSGFETAAH ELLADEAVDL ADGLSLPAHG VLWLRVTPRP AG
|
| |