Gene Bfae_25400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_25400 
Symbol 
ID8401085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp2836600 
End bp2837733 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content73% 
IMG OID644998588 
Productpyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component alpha subunit 
Protein accessionYP_003155911 
Protein GI257069656 
COG category[C] Energy production and conversion 
COG ID[COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.198621 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCCAGC TCCTCGCGGC CGACGGCACC CGCACCCCGC ACGCGGAGCT CGACGCCGTG 
CTCGAGGAGA GCGGCCTGGC CACGCCCGAG CGCCTGCGCG GCTACTACCG CGACATGGTG
ATGATCCGCG GCGCGGACCT CGAGGCCACC AACCTGCAGC GCCAGGGCCA GCTGGGCCTG
TGGGCCAGCG CGCTGGGGCA GGAGGCCGCG CAGATCGGCG CCGGCCACGC CTCCCGCGAG
CAGGACTACC TCGTGCCCAC GTACCGCGAG CACGGCGTGG CCTGGGCGCG CGGCATCGAG
CCGTGGCGCC TGCTGGAGCT GTTCCGCGGC ATCAGCCACG GCGGCTGGGA CCCCAACGAG
CTGCGCACCC ATCCGTACAT GATCGTGCTC GGCTCCCAGG CCCCGCATGC GGTCGGCTAC
GCGATGGGGC TGCAGCGCGA CGGGGTCGTC GGCACCGGCG ACCTCTCGAC CGACGCGGCC
GTGCTGGCGC TGTTCGGCGA CGGCGCCTCG AGCGAGGGCG AGGTCGCCGA ATCCTTCACC
TTCGCCGCCT CGTTCCAGGC CCCCGTCGTC TTCTACACCC AGAACAACCA GTGGGCCATC
TCGGTGCCCA CCCAGGTCCA GTCCCGCGTG CCGCTCGCGC AGCGCTCCCG CGGCTGGGGC
ATCCCCTCGG TGCGGGTGGA CGGCAACGAC GTGCTCGCCG TGCTCGGCGC GGTGCGCACC
GCGCTGGACT CCGCCCGCGA CGGCCGCGGC CCCGTGTTCG TCGAGGCGCT CACCTACCGC
ATGGCCGCGC ACACCACGAG CGACGACGCC TCGCGGTACC GCCCCGCCGC GGAGGAGGAG
GAATGGGCCG CGAAGGATCC GATCCTCCGC CTGCGCCGCC ACCTCGCCCA GCTCGACGAG
ATCGACGAGC AGTTCGTCGC CCGCTGCGAC GAGGAGGCCC ACGACCTCGC CATGCAGCTC
CACCACCACA TCCACGGCAT GGAGGACCCG GACCCGGTGC ACATGTTCGA CCACCCCTAC
GCCGAGCCCC ATCCGATCGT CGACGCCGAG CGCGCCGAGT ACCTCGAGTA CATCGCGCAG
TTCGAGGACG ACCCCTCCGC CGACACCGCG ACCTCCGAGG AGGGCCGGGC ATGA
 
Protein sequence
MVQLLAADGT RTPHAELDAV LEESGLATPE RLRGYYRDMV MIRGADLEAT NLQRQGQLGL 
WASALGQEAA QIGAGHASRE QDYLVPTYRE HGVAWARGIE PWRLLELFRG ISHGGWDPNE
LRTHPYMIVL GSQAPHAVGY AMGLQRDGVV GTGDLSTDAA VLALFGDGAS SEGEVAESFT
FAASFQAPVV FYTQNNQWAI SVPTQVQSRV PLAQRSRGWG IPSVRVDGND VLAVLGAVRT
ALDSARDGRG PVFVEALTYR MAAHTTSDDA SRYRPAAEEE EWAAKDPILR LRRHLAQLDE
IDEQFVARCD EEAHDLAMQL HHHIHGMEDP DPVHMFDHPY AEPHPIVDAE RAEYLEYIAQ
FEDDPSADTA TSEEGRA