| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_24620 |
|---|
| Symbol | |
|---|
| ID | 8401007 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | + |
|---|
| Start bp | 2753913 |
|---|
| End bp | 2755187 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644998511 |
|---|
| Product | carbohydrate-binding protein |
|---|
| Protein accession | YP_003155840 |
|---|
| Protein GI | 257069585 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCATCCT CCCCCGGAGA ACCCGGACCG TTCACCCGCC GCAGCCTGCT GGCCGGAGCC
GGCGGCGCGC TCGCCGCGAC CGCCCTGTCC GCCTGTGCAG GGGCGAGCGG CGCTTCCGAG
CTCACGCTCT ACCAGTCCAA ACCCGAGGCG ATCCCCCGCT TCTCGCAGCT CGCGGCGGAG
TTCTCCTCCT CCCAGCAGCG CTTCGCCGTC CAGCACGACA TCGCCACGAA CCTCTCGGCG
AGCTTCGTGC GCAACAACCC GCCGGATCTC GGCTGCCTGA ACTACAACCT CGAGATGGGC
CGCTTCATGG AGCGCGGCGC GCTCTCGGAC CTCTCGGACC TGCCCGAGGC GGGCCGGATC
CGTGAGGACG TCGCGGAGCT CGCCGACTGG TACCCCACCT ATGAGGGCCG CACCAGCGTG
CTGCCCTACT CGGTGACCGC CGCCTCGGTG ATCTACAACC GCCGGATCTT CGACGAGCAC
GGCCTCGAGG TGCCCACCAC CTGGGAGGAG ATGCTCGCGG TCTGCGAGAC GCTGCAGGCC
GCGGAGGTCA CCCCCATCTA CGCGACCTTC CTCGATGCGT GGACCGTGGC CCAGGGCCTG
TTCGACTACA CCGTCGGCGG CCTCGTGGAC GTGCGCGCGT TCTACGCGGC GATGACCGAG
ATCGGCGAGG ACGTCGGCCC GGAGTCCGAG GTCTCCTTCC AGCGCACCCT GCTGGAGCCG
GTGCAGCGCA TGACCGAGCT CGTCGCCTTC ACCAACCGCG ATGCGAACAA CCGCGCCTAC
GGCGACGGCA ACACCGCGAT GGCCCAGGGC GAGGCCGCGA TGTACTTCCA GGGGCCGTGG
GCCTTCGGCG AGATCGAGAA GGCCGGCACG GACGTGGAGC TGGGCACCTT CCCGCTCCCG
GTGACCGACG ATCCCGCCGA TCTGAAGGTC CGCGTGAACA TCGACCTCTC GCTGTGGATC
CCGGAGGCGG CGAACGAGCA GGAGGGTGCC CGGGAGCTCG CGCAGTTCCT CATGCGCCCC
GAGGTGCAGG ACCCCTACAA CGCGGAGTTC CTCGCCTTCG GCACCACCGA GGACGCCCCG
CCGGTGACCG ACGAGCGGAT CGTCGAGATG CAGCAGTACT ACGACGAGGG CCGCTTCTAC
ATGGGCGCCT CGCAGTTCAT CCCGAACTCG ATCCCGGCCG AGAACTACAT CCAGTCGATC
GCCGGCGGCG CCGATCCCGA ACCGGTCCTG GCGCGCATGG ACGCCGACTG GGCCCGGCTC
GCCTTCCGGG AGTGA
|
|---|
| Protein sequence | MSSSPGEPGP FTRRSLLAGA GGALAATALS ACAGASGASE LTLYQSKPEA IPRFSQLAAE
FSSSQQRFAV QHDIATNLSA SFVRNNPPDL GCLNYNLEMG RFMERGALSD LSDLPEAGRI
REDVAELADW YPTYEGRTSV LPYSVTAASV IYNRRIFDEH GLEVPTTWEE MLAVCETLQA
AEVTPIYATF LDAWTVAQGL FDYTVGGLVD VRAFYAAMTE IGEDVGPESE VSFQRTLLEP
VQRMTELVAF TNRDANNRAY GDGNTAMAQG EAAMYFQGPW AFGEIEKAGT DVELGTFPLP
VTDDPADLKV RVNIDLSLWI PEAANEQEGA RELAQFLMRP EVQDPYNAEF LAFGTTEDAP
PVTDERIVEM QQYYDEGRFY MGASQFIPNS IPAENYIQSI AGGADPEPVL ARMDADWARL
AFRE
|
|---|
| |