| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_24580 |
|---|
| Symbol | |
|---|
| ID | 8401003 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | + |
|---|
| Start bp | 2749320 |
|---|
| End bp | 2750231 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644998507 |
|---|
| Product | ABC-type proline/glycine betaine transport system, permease component |
|---|
| Protein accession | YP_003155836 |
|---|
| Protein GI | 257069581 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4176] ABC-type proline/glycine betaine transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0193054 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCGC AGGACGATTC CTTCATGCCC CGCGTGCCGG TCGGCGAATG GGCCGACAGC
GCCATCGACT GGCTGAAGGC GAACCTCTCC TGGCTGTTCG ACGCCTTCCG CACCGTGATG
GGCTTCCTGG TCGACAACCT CACCGACCTG CTGCTGCTCG TGCCCGCGCT CGTGGCGATC
CCGGTGTTCG CCCTCATCGC GCTGACGCTG CGCTCCTGGA AGCTCGCCGT GGGCACCGTG
ATCAGCTTCG CGCTCGTGCT CTCGATGGAC CAGTGGGAGA CGATGATGCA GACCATGGCG
CTGGTGCTGG TCGCCACCGC CTTCGCCGTG CTCATCGCGG TGCCGCTGGG CGTCCTCGCC
TCCCTCAACA GCACGGTGAG CGCGATCGTC AAGCCGGTCA TGGACTTCAT GCAGACCATG
CCCGCCTTCG TCTACCTGAT CCCGGCGGTC ACCTTCTTCT CCATCGGAGT GGTCCCCGGC
ATCTTCGCGA CCATCATCTT CGCGCTGCCC CCGGGGGTGC GGATGACCGA GCTGGGGATC
CGTCAGGTGG ATTCCGAGAC CGTCGAGGCC GGCGAGGCCT TCGGCGCGAC CCCCTGGCAG
ATCCTCCGCG GCATCCAGCT GCCGCTGGCG ATCCCCACCA TCATGGCGGG CGTCAACCAG
GTCATCATGC TCGCGCTGTC CATGGCCGTG GTCGCCGGCA TGGTGGGTGC GGACGGCCTG
GGCAAGGAGG TCGTGCAGGC GATCTCGACC CAGAACCTGG CGCTCGGCGT CGAGGCCGGT
CTCAGCGTGG TCGTGCTGGC CGTCTTCCTC GACCGCCTCA CCGCGGCCCT CGGCAACCCC
GGCGACTACC GGACCTCGCT GATCGCCCTG ACCCAGCGCG CGATCGCTCA GCGCGCCACC
ACCACGGTCT GA
|
|---|
| Protein sequence | MTPQDDSFMP RVPVGEWADS AIDWLKANLS WLFDAFRTVM GFLVDNLTDL LLLVPALVAI
PVFALIALTL RSWKLAVGTV ISFALVLSMD QWETMMQTMA LVLVATAFAV LIAVPLGVLA
SLNSTVSAIV KPVMDFMQTM PAFVYLIPAV TFFSIGVVPG IFATIIFALP PGVRMTELGI
RQVDSETVEA GEAFGATPWQ ILRGIQLPLA IPTIMAGVNQ VIMLALSMAV VAGMVGADGL
GKEVVQAIST QNLALGVEAG LSVVVLAVFL DRLTAALGNP GDYRTSLIAL TQRAIAQRAT
TTV
|
|---|
| |