Gene Bfae_23400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_23400 
Symbol 
ID8400885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp2619035 
End bp2620270 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content73% 
IMG OID644998391 
Product16S RNA G1207 methylase RsmC 
Protein accessionYP_003155722 
Protein GI257069467 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2813] 16S RNA G1207 methylase RsmC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.498455 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCCCACA CTCCCGCCGC AGATGCTGTC GACGAGGACC CCGCCGTCGG GGCTCCCTAT 
GACACGGGTC CCGTCGCTCC GACTCCTCAG GGCCCGGACC AGACGGACCG CGTGATCATC
GCGGCGGCCG AGGAGATCGG CACCGGCTGT CCCTGCGGCC TGATCGTGGT CGACGACGCG
ACCGGCGAGC TCACCGCCTT CGCCCTCGCC TCCGTGGCAG AGCACCCTGA CGCGGTGGTG
CTCAGCTGGA CCTCCTCGCT CCCGCTCGCG ACCTCTCTGC GCGAACGCTT CGCCGGGCAG
ATCGAGGCCG GTCGCCTGCA TGTCCCTGCA GGTCCCGACG TCCTCCCGCT CGAGCAGGCC
GCCGCCGAGG TCGAGGGGCA CCTGCTCGTG CTCATGCGCC TGCCCAAGGC CGTCCACGCT
CTCGAGGACC GGGCCCGACG GCTCGCCGCG GCGGTCCGGA CCGGTGGTCA GGACGGTCTC
GGGATCATCG CGGGCGGGCG TGTGAAGCAC ATGACCCGGG CGCAGAACGA CGCACTCGCG
ACGGTCTTCT CGGAGGTCCG GGCGAGCCGC GGGATCGGCA AGTCCCGCGC CCTCATCGCG
ACCGAGCTCC GGGCATCCAG CGCGGCCCCG GTCGCGATCG ACGGCTCCGC ACGAGTCGCC
GTGCGTGGGC AGCAGAGGGA GCTCGCCCTG CGCGGAGTGG GCGCCGTCTT CGGCGGAGCA
TCGGCCGACG CCGGCAGCCG TCTGCTGCTG CAGGCTCTCG ACCGTGCCCT GGTCTCCGGG
GACCTCACCG CCGACGCCCC GGTCACCGCC GCCGCGGACC TCGGCTGCGG CAACGGGCTC
ATGACCGCCC ATCTCGCCGC GGCCCTGCCC GAGGCGAGCG TGCTGGGAAG CGATGCGGAT
GCGGATGCCG TCAGCTCCAC CCGCGCGACT CTCGCCGCCA ATGCCCTCGA GCGCGAGGAG
GTGGAGGTGA GCTGGGACGA TGCGCTGTCC AGGGTCGCCG ATTCGAGCCT GGACCTGGTG
CTGCTGAACC CTCCCTTCCA TGACGGCACC TCGGTCGACG CGACGCTCGT GCAGGGTCTG
CTCGACACCG CCGCGCGCGT GCTGCGCCCC GGCGGGCAGC TCTGGTTCGT GCACAACTCC
CATCTGCGGT ACCGCACCGA GGTGGAGCGG CGGGCCGGCG CGGTGCAGCA GCGCGCCCGC
GACCGCCGCT TCACCGTGCT CAGCGCGGTG CGCTGA
 
Protein sequence
MPHTPAADAV DEDPAVGAPY DTGPVAPTPQ GPDQTDRVII AAAEEIGTGC PCGLIVVDDA 
TGELTAFALA SVAEHPDAVV LSWTSSLPLA TSLRERFAGQ IEAGRLHVPA GPDVLPLEQA
AAEVEGHLLV LMRLPKAVHA LEDRARRLAA AVRTGGQDGL GIIAGGRVKH MTRAQNDALA
TVFSEVRASR GIGKSRALIA TELRASSAAP VAIDGSARVA VRGQQRELAL RGVGAVFGGA
SADAGSRLLL QALDRALVSG DLTADAPVTA AADLGCGNGL MTAHLAAALP EASVLGSDAD
ADAVSSTRAT LAANALEREE VEVSWDDALS RVADSSLDLV LLNPPFHDGT SVDATLVQGL
LDTAARVLRP GGQLWFVHNS HLRYRTEVER RAGAVQQRAR DRRFTVLSAV R