Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bfae_22610 |
Symbol | |
ID | 8400807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brachybacterium faecium DSM 4810 |
Kingdom | Bacteria |
Replicon accession | NC_013172 |
Strand | - |
Start bp | 2542924 |
End bp | 2544915 |
Gene Length | 1992 bp |
Protein Length | 663 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644998317 |
Product | choline/carnitine/betaine transport |
Protein accession | YP_003155648 |
Protein GI | 257069393 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1292] Choline-glycine betaine transporter |
TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.524203 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCGATG ACGAGCAGGA TGTCGGCCGA CGGAGTCCCG TGCGGCAGGA GCGGGCCGAC CGGCCCGCCG GAAACCCGCT GGCGAGCATC GACTATTCGC GGCCCCAGTA CCCCCATGAC ATCCACCCGG CCCTGGTGCC GGGAATCGCC ATCGACGAGC AGCGCCGCCG CTACAGCGTG GACAAGATCG TGTTCGGCGT GGCCGGTGCG CTCACCGTCG GTTTCGTGAT CTGGGGCGTC ATCGACCCGG CGGGCGTCGG CGAGGTGGCC GATGCCGCCT ACGGCTGGAC GATGACGCAC CTGGGCTGGC TGTTCAACGC CGTCGCCACC GTGGTGCTGG TCTCCCTGCT GATCCTGGCC TTCTCCCGCT ACGGGAAGAT CCCGCTGGGC AAGGACGGGG AGAAGCCCGA GTTCTCCACC TTCTCGTGGG TGGCGATGCT GTTCGCCGCC GGCCTCGGCA TCGGCGTGAT GTTCTGGGGC CCCTCGGAGC CGCTCACCTA CTTCCTGACC CCGCCGCCGC GGACCAACGA TCCCGAATCG GTCGAAGCGA TGCACATGGC GCTCGCCCAG ACCTACTACC ACTGGGGCTT CCACGCCTGG GCCATGTACG CCCTGGTGGG AGGAGCCGTC GCCTACGCCG CCTACCGGCG CGGCCGCACC CTGCTGATGT CCTCGATCTT CGAGCGGCTG TTCGGCAAGA AGCTCACCGA GGGCTGGGCC GGCCAGCTGG TGGACATCTT CGCGATCATC GCGACGCTGT TCGGCACCGC CGCGGCCCTC GGGATCGCCG TGCTGCAGAT CGGTGAGGGC GTGGTGATCG TCTCCGGCGC CTCCGAGCTG ACCAACACCG TGATGATCCT GATCATCGGC GTGCTCTCGG CCGGTTTCGT GATCTCCGCC GTCTCCGGCG TCTCGCGCGG CATCCGCTAC CTCTCGAACA TCAACATCGT GCTCACGATC GGCTTCGCCG GGATGCTGTT CATCCTGGGG CCCACCCTGT TCCTGCTGAA CCTGCTGCCC TCGGCCGTCA TGGAGTACGC CGCCTCGCTG TTCGAGATGA TGGCGCGCTC GGCCTCCTGG GGCTCGGACA CGCTCGACTT CCAGTCCACC TGGACCGTGT ACTACTGGGC GTGGTGGATC TCCTGGTCGC CCTTCGTGGG CATCTTCATC GCCCGCATCT CCCGCGGCCG GACCATCCGC CAGTTCCTGC TCGGCGTCAT CGGCATCCCC TCCTCGCTGC TCTTCGTGGC CTACGGGATC ATGGGCGGCA CCGCGATCTC GATGTACCGC GAGGGCAAGC TCGGCGAGCT GGACTCGGTG AACCCGGCAC AGGTGCTGTT CTCGATGGCG GACAACCTCC CGCTCTCCGG CGCGCTGCCC GTGCTGATCA TGGTCATCCT GGCGATCTTC TTCATCACCG CCGCGGACTC CGCCTCCGTG GTGATGGGCA TCCTCACCAC GCGCGGCAGC CAGAACCCGC CCAAGCTGAT CGTCGTCTTC TGGGGCCTGG TCATGGGCGG GATCGCCGTG GTCATGCTGC TGCTGGGCGA TGAGACCGCC CTCGAGGGGC TGCAGTCGCT GGTGATCATC ACCGCCGTGC CCTTCGCCTT CGTGATGCTG ATGGTCATCG TCGCCTGGGT GCGCGAGCTG CGCACCGACC CGCTCACCCT GCGCCAGCAG TACGCGGAGG TCGTGGTGAG CAACGCCGTC GTGGACGGTG TGGACCGCTT CGACGACGAC TTCAGCCTGC AGGTGGTCCG TGCCAAGCCC GGTGAGGGCG CGGGCGCGGA TGTCGACTCC ACCCATGAGG ACTACACCGA GTGGTACCAG CGCACCGATG AGGAGGGCGA ACCGGTCGGG TTCGACTTCG CGACCGGGGA ATGGGCCGAC GGGTGGACGC CGGAGACCGG GGAGATCGAG ACGGTCGCGG CGGACGGCGA CGCCCCGTCC TCTCCCGAGG GCGGCTCGCC CGAGTCGCCG CAGACGAGCT GA
|
Protein sequence | MSDDEQDVGR RSPVRQERAD RPAGNPLASI DYSRPQYPHD IHPALVPGIA IDEQRRRYSV DKIVFGVAGA LTVGFVIWGV IDPAGVGEVA DAAYGWTMTH LGWLFNAVAT VVLVSLLILA FSRYGKIPLG KDGEKPEFST FSWVAMLFAA GLGIGVMFWG PSEPLTYFLT PPPRTNDPES VEAMHMALAQ TYYHWGFHAW AMYALVGGAV AYAAYRRGRT LLMSSIFERL FGKKLTEGWA GQLVDIFAII ATLFGTAAAL GIAVLQIGEG VVIVSGASEL TNTVMILIIG VLSAGFVISA VSGVSRGIRY LSNINIVLTI GFAGMLFILG PTLFLLNLLP SAVMEYAASL FEMMARSASW GSDTLDFQST WTVYYWAWWI SWSPFVGIFI ARISRGRTIR QFLLGVIGIP SSLLFVAYGI MGGTAISMYR EGKLGELDSV NPAQVLFSMA DNLPLSGALP VLIMVILAIF FITAADSASV VMGILTTRGS QNPPKLIVVF WGLVMGGIAV VMLLLGDETA LEGLQSLVII TAVPFAFVML MVIVAWVREL RTDPLTLRQQ YAEVVVSNAV VDGVDRFDDD FSLQVVRAKP GEGAGADVDS THEDYTEWYQ RTDEEGEPVG FDFATGEWAD GWTPETGEIE TVAADGDAPS SPEGGSPESP QTS
|
| |