Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bfae_21370 |
Symbol | |
ID | 8400683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brachybacterium faecium DSM 4810 |
Kingdom | Bacteria |
Replicon accession | NC_013172 |
Strand | - |
Start bp | 2396302 |
End bp | 2397570 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644998197 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_003155534 |
Protein GI | 257069279 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.100651 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACGTCC TCGACCAGTC CATCGACGCT CTCGACCCGG ACATCGCCCA GGTGCTCGAC CGCGAGCTGG CACGCCAGCA GCGCACGCTC GAGATGATCG CCAGCGAGAA CTTCGTCCCC CGGGCGGTGC TGCAGGCGCA GGGATCGGTG CTGACGAACA AGTACGCCGA GGGCTACCCG GGCCGGCGCT ACTACGGCGG CTGCGAGGAG GTCGACGTCG CCGAGCAGAT CGCGATCGAC CGGGCGAAGG AGCTCTTCGG CGCCGAGCAC GCCAACGTGC AGTCCCACTC GGGCGCCTCC GCGAACGCCG CGGTGATGCA CGCCCTGGCC CGCCCCGGGG ACAAGCTCAT GGGCCTCTCC CTCGCACACG GCGGCCACCT CACCCACGGC ATGAAGATCA ACTTCTCCGG CCGCCTCTAC GACATCGTCG CCTACGAGAC CGAGCCCGGC ACCGGCCTCA TCGACATGGA CAAGGTGCGC GAGCTGGCCG TGGCCGAGCA GCCCAAGGTG ATCGTCGCCG GCTGGTCCGC CTACACCCGC CAGCTCGACT TCGCGAAGTT CCGGGAGATC GCCGACGAGG TCGGCGCCGC CCTCTGGGTG GACATGGCGC ACTTCGCCGG GCTCGTCGCC GCCGGCCTGC ACCCCAACCC CGTGCCCTAC GCGGACGTGG TCTCCACCAC CATCCACAAG ACGATCGGCG GCCCCCGCTC CGGCATGATC CTGTGCACCG AGAAGTGGGC CAAGAAGATC GACTCGGCCG TGTTCCCCGG CCAGCAGGGT GGCCCGCTCA TGCACGTCAT CGCCGCGAAG GCCGTCGCGC TGAAGGTCGC CGCCTCCGAG GACTTCAAGG ACCGCCAGGC CCGCACCCTC GAGGGTGCGC GGATCATCGC CGAGCGCCTC CAGGCGGAGG ACGCGAAGGC GGCCGGCGTC AAGGTGATCT CCGGCGGCAC CGACGTGCAC CTCGTGCTGG TGGACCTCGT GGACAGCGAG CTCGACGGCC AGCAGGCCGA GGACCGCCTC CACGAGGCCG GCATCACCGT CAACCGCAAC GCGGTGCCCA ACGACCCGCG CCCGCCCCGG GTCACCTCCG GCCTGCGGAT CGGCACCCCG GCGCTGGCCA CCCGCGGCTT CGGCGCCGCA GAGTTCACCG AGGTCGCCGA CGTCATCGCC CTGACCCTCA CCGGCGGCGC CGACATCGAG ACGCTCCGTG CGCGCACCGC AGCCCTCGCC GAGGCGAAGC CGCTGTACGC CGACCTCCAG CAGTACTGA
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Protein sequence | MNVLDQSIDA LDPDIAQVLD RELARQQRTL EMIASENFVP RAVLQAQGSV LTNKYAEGYP GRRYYGGCEE VDVAEQIAID RAKELFGAEH ANVQSHSGAS ANAAVMHALA RPGDKLMGLS LAHGGHLTHG MKINFSGRLY DIVAYETEPG TGLIDMDKVR ELAVAEQPKV IVAGWSAYTR QLDFAKFREI ADEVGAALWV DMAHFAGLVA AGLHPNPVPY ADVVSTTIHK TIGGPRSGMI LCTEKWAKKI DSAVFPGQQG GPLMHVIAAK AVALKVAASE DFKDRQARTL EGARIIAERL QAEDAKAAGV KVISGGTDVH LVLVDLVDSE LDGQQAEDRL HEAGITVNRN AVPNDPRPPR VTSGLRIGTP ALATRGFGAA EFTEVADVIA LTLTGGADIE TLRARTAALA EAKPLYADLQ QY
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