| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_20630 |
|---|
| Symbol | |
|---|
| ID | 8400609 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | - |
|---|
| Start bp | 2305764 |
|---|
| End bp | 2307470 |
|---|
| Gene Length | 1707 bp |
|---|
| Protein Length | 568 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644998123 |
|---|
| Product | lipoprotein LpqB family protein/sporulation and spore germination protein |
|---|
| Protein accession | YP_003155460 |
|---|
| Protein GI | 257069205 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.373808 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGAC CCGCACGGCG CGACCTGCTG CGGGTGGCCG GTGCCGCCGC GGTGCTCGGG
GTGGGAGCCG CCTGCGCACG GATCCCCACC GACTCGCCGA TCGCGCGCCG CGAGCTGACG
GGCCAGTCGC AGCCCGGCGC CCCCTACGTG CGGGCCCTGC CCCCGCCGTC CGACGCCACC
GCCCAGGAGG TGGTCTCCGG CTTCGTCCAG GCCGGGGTCG GCCCCGAGGA CGACTACGCC
GTGGCGCGCT CCTATCTCAC GCCGGAGGCC TCCCCGGACT GGGACCCCTC CTCGCTCATC
ACGATCTACT CCGGCAGCGA GGAGCTGAAG GTCGAGGACC TCGGGGACGA CCGCTTCGCG
ATGGTGCTCC AGGTGGTCGC CCTCGTCGAC GGCCGCGGGG TGCGCAGCCT GCTGGCCGGT
CCCGTCACGC GCGAGATCGA GGTCGCGGTC GAACAGATCG ACGACCAGTG GCGCCTGAGC
GAGGTGCCCG ACGGGATCTT CCTCTCCGAG GCGGCTTTCG AGACGCTGTA CGGACCGGCC
AGGCTCTACT TCCTCGACTC CCGCCAGCGC CACCTGGTGC CCGACCATCG CTGGTTCCCG
CTCCGCCGCG GTGCCGAGGC GGTGCTCGAA GCCCTCGTCG GCGGCCCGGC CACCTTCCTC
GAGGGGGCGG TGACGAACCA GGTGCCTCCG GCCTCCGACA TCGCGGACGC CGCGACCACC
ACCGGCGTGG ACGGCACCGC GAAGTTCGCG GTGCCGCCCG CGATCGCGAA CCTGCCCCAC
GAGCAGAGGA TCCTCGCCCT GTCGCAGCTG GAGGCCTCGC TGCGCTCGCT GCGCACGCTC
TCCGGGGTGC GCCTGGTCCA GGACGGCCAG GACGTGGTGC TCGAGGAGCA GGACCGGCCC
GAGCGCACCC TGCCCGGGCA TCGGCCGATC GCGGCAGGAC CCACGGGTGT CATCTCGCTG
TCCGAACCCG GCGCCGCCGG ACCCCCCGAA CAGCTGGTGC CCGGCTTCAC CGACCTCGAG
GTCTCCGCAC CGGTGATCGC GCAGGACGGG GTGCTGGCCG CGGCCCTGGA CCCCGAGGAG
TCCAGCGTGC TCATCACCGC CGCCGACGGC TCACGGGACG TGCGCGAGGC GGCGACCGGC
GGGGCCTTCG TCGCCCCGCG CGTGGACGAC GCCGGCTTCG TGTGGACCTC GATCCGCTCC
AGCCCCGGCG CGCTGCTCGC CCTGTCCGGC CAGGGCTCCG ACCTCGACGC GAAGGTCGAC
GCCCCCTGGC TGGTGGGCCG TGAGATCCTC GCCCTCGACA TCGCGGCCGA CGCCACCCGG
ATGATCGTGC TCTCCTCGGA TGCGGGCGGG GCCCGCGTGG ACCTGTGCGC GGTGGTCCGC
GACGGCGAGG GCGTGCCCAC CTCCCTCACC GAGCCGGTCC CGGTCCGCAC CTTCCTCACC
GACGTCACAC AGGCCGTCTG GTACGACGAG ATCGCTCTGA TCGTGCTCGG CACCGAGCCG
TCCACGGACG AGCGGCGGGC CCAGATCGTC GACTACGTCA ACGGGCGCGA ATCGCTGCCG
GCCCTCGTCT CCGGCACGGA CCGCATCGCC GGGTCCGTGG TGGCCGAGGC GGTGTGGGCC
GGCACCGCGG ACGGCGAGCT GCTGCGCAGC GACGGCGAGT CATGGACCCC GGTCGACGTC
GAGGGACGCG ACCCCTCGTT CTACTGA
|
|---|
| Protein sequence | MNRPARRDLL RVAGAAAVLG VGAACARIPT DSPIARRELT GQSQPGAPYV RALPPPSDAT
AQEVVSGFVQ AGVGPEDDYA VARSYLTPEA SPDWDPSSLI TIYSGSEELK VEDLGDDRFA
MVLQVVALVD GRGVRSLLAG PVTREIEVAV EQIDDQWRLS EVPDGIFLSE AAFETLYGPA
RLYFLDSRQR HLVPDHRWFP LRRGAEAVLE ALVGGPATFL EGAVTNQVPP ASDIADAATT
TGVDGTAKFA VPPAIANLPH EQRILALSQL EASLRSLRTL SGVRLVQDGQ DVVLEEQDRP
ERTLPGHRPI AAGPTGVISL SEPGAAGPPE QLVPGFTDLE VSAPVIAQDG VLAAALDPEE
SSVLITAADG SRDVREAATG GAFVAPRVDD AGFVWTSIRS SPGALLALSG QGSDLDAKVD
APWLVGREIL ALDIAADATR MIVLSSDAGG ARVDLCAVVR DGEGVPTSLT EPVPVRTFLT
DVTQAVWYDE IALIVLGTEP STDERRAQIV DYVNGRESLP ALVSGTDRIA GSVVAEAVWA
GTADGELLRS DGESWTPVDV EGRDPSFY
|
|---|
| |