| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_20480 |
|---|
| Symbol | |
|---|
| ID | 8400594 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | + |
|---|
| Start bp | 2289955 |
|---|
| End bp | 2292462 |
|---|
| Gene Length | 2508 bp |
|---|
| Protein Length | 835 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644998108 |
|---|
| Product | ABC-type transport system, involved in lipoprotein release, permease component |
|---|
| Protein accession | YP_003155445 |
|---|
| Protein GI | 257069190 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCGCA CCCCCGTGAA GCTCACCCCG CTGCGCCGCC ACGTCGCCGC CGTCATCACG
ATCGCGCTCT CCTGCGCGTT CGTCGCCGTG ATGGTGCTGG CCGGGAACCT CATGCAGGCC
TCCCTCCGCT CGGAGGCCAC CCAGATGTAC GAGGGCGCGG ACCTCGAGAT CACCCGGGAC
CTGAGCGACG CCGACTGGGC CTCGGAGACG CCGCTGCCCG CACCGGAGGT CGACGGCGCT
GAAGCGGTCT GGCCGCAGAT GAACGAGTAC CTCATGCTCT CCTCCGCGGC CTCCGACACC
TTCCTCCGGG CCGGCATGCT GCCCCCCGCG GACACCGCCG CCCAGAGCCT CGACGAGGGT
GCCCGCGCCG CGGACGACAC CGAGATCGTG CTCGACCGCA ACGCGGCCGA CACCCTCGAC
GTCGGCCTCG GCGACACCGT CACCCTGCCC GCCGATTTCT CCCCCGACGC CGAGGAGCAC
TCCCTCACCG TGGTCGGCAT CGCCCCCGCA CCCGAAGGAG CCGTCTTCGG CGCGACCCCG
CGGGTCCTGG TCGACGAGGC GAACGCCGAG GCGCTCCTCG GCCCGACCGC CGGCACGCTC
ACCTCCGCCT GGCTGGCCTC GCTGCCCGAG GGCACCGACG CCGCGGCCGT CGCCGAGAGC
GCCGGCGGGG ACGACATCAC CGTCCGCACC ACCGAAGAGG CCGAGCAGCA GGCCGCGGAC
GACTTCATGC AGGGATTCGG CGCGCTGGGC ATGATGCTCG CCGTCTTCGT GGTGATCGCC
CTGTTCACCA GCGCCGTGGT CATCGCCAAC ACCTTCTCGG TGACGATCGC CCAGCGCACC
CGCTCCCTCG CCCTGCTGCG CACCCTGGGT GCGTCACGGT CCCAGGTGCG CGGCGTGGTG
CTGCGGGAAT CGTTCCTCGT CGGACTGCTC GGCGCGGCCG CCGGCATGGT GGGCGGCCAC
CTGCTGGTGC AGGCCGCTCT GCTCGGCGCC GCCGGGATCG GCTGGCTCGA CGGGGTGATG
ATCGCCCCGC TCAGCGTCCT GTCGGTGCTG CTGCCGGTGA TCGCCGGCGT GGCGATCACC
CTGCTGGCGA GCCTCGCCCC GATGCGCTCG GCGACCCGGG TGGCGCCGCT GCAGGCGCTG
CGCCCGGCGC CGCCCGCCCA GCGTCGCGGG CTCGGCGTGC AGGGTGTGCT CGGTCTCGTG
GCCATCGTGC TCGGGATCTC CGCCCTCGCC GCCGGCACCA TGCTCGCGCT GAACGAGTAC
GCCGGCCTCG GGGTCCTCGC CGCGATGTTC GGCGGCGTCG TGAGCTTCAC CGGGGTTCTG
CTGACCCTCG TGGTGCTCAC CCGTCCGCTC TCCGCCCTCG CGGCCCGGGT GGTGGGCCGG
ATCGGCGGGC TGCCGGGCCG GATCGCCGGC GCGAACGTGG CCCGCAACCC TCGACGCAGC
GCCGCCACCA TCGCGGCACT GCTGATCGGG ACCACGCTCA TGACGATGAT GGCCGTCGGC
GCCCGCACCG CCGAGTCGAC GCTCACCTCG GAGCTGGACT CCCGCCGCCC GATCGACCTC
GTCATCAGCG CCGAGACCAT GCCCGAGGAC GCGGACGCGC AGATCGCCGC GATCGACGGC
ATGGACACCG CGCACTCCTC CGCCCGCGCC GACATCGACG TGGGAGTTCC CGAGCCGATG
ACGCTGTACT CCGCGACGCC CGAGGCGCTC GAGGAGACCT CGCACCGGCC CGAGATGACC
TCGGAGCTGC GTGACGGCGT GGTGCTGCTC GGCCAGGAGC GCTCCGAGCG CTTCGGGGTC
GAGGACGGGC AGGTGCTCGA GATCGAGGGA TCCGACGGCG CCGTGCACGA GCTGCGGGTG
CAGGTCGACG CGAACCTGCA GATGTCCCTG GTCACGCCCA CCACCCTCGA GGAGCTCGTC
GGGGACGAGA CCCGACCGGT CGTGCTCGCC GACTTCGCGG ACCCGGGCAC CCCCGCCCGG
GAAGGGGTCG ATGCGCTCGC ACTGATGAGC TCCGTGGAGG AGGTCATCTC CGGCAGCGAC
TACTCCGAGG CGTCGATGGT CGCCGGCGGC ACCGAGCGGG AGTCCTATGC CCAGATCCTC
CAGATCCTGC TGGGCATCAC CGTCGCCCTG CTCGCCGTCG CGGTGCTCGT GGCGCTCGTG
GGGGTGGCCA ACACCCTCAG CCTCGGCGTC ATCGAGCGCA CCGGCGAGAA CGCGCTGCTG
CGGGCGCTGG GCACCACCCG CCGTCAGATG CGGGCGATGC TCGGCTGGGA GGGAGTGCTG
CTCGCGCTCG TCGGTGCGGT GCTGGGCCTC GTGCTCGGCA GCGTGTACGG GGTGCTCGGG
ATCAACGCCC TGCTGAGTTC GACCTACCCG GTCACGATCA CGATCCCCTG GTGGCAGCTC
GCCACGGTGC TGGTGCTCGC GGTGGTCGCC GGCGCTCTCG CCTCGGTGCT GCCGGGACGA
GCCGCGGCCC GCACCGCCCC GGCGGCCGCC CTCGCCGACG CGGACTGA
|
|---|
| Protein sequence | MARTPVKLTP LRRHVAAVIT IALSCAFVAV MVLAGNLMQA SLRSEATQMY EGADLEITRD
LSDADWASET PLPAPEVDGA EAVWPQMNEY LMLSSAASDT FLRAGMLPPA DTAAQSLDEG
ARAADDTEIV LDRNAADTLD VGLGDTVTLP ADFSPDAEEH SLTVVGIAPA PEGAVFGATP
RVLVDEANAE ALLGPTAGTL TSAWLASLPE GTDAAAVAES AGGDDITVRT TEEAEQQAAD
DFMQGFGALG MMLAVFVVIA LFTSAVVIAN TFSVTIAQRT RSLALLRTLG ASRSQVRGVV
LRESFLVGLL GAAAGMVGGH LLVQAALLGA AGIGWLDGVM IAPLSVLSVL LPVIAGVAIT
LLASLAPMRS ATRVAPLQAL RPAPPAQRRG LGVQGVLGLV AIVLGISALA AGTMLALNEY
AGLGVLAAMF GGVVSFTGVL LTLVVLTRPL SALAARVVGR IGGLPGRIAG ANVARNPRRS
AATIAALLIG TTLMTMMAVG ARTAESTLTS ELDSRRPIDL VISAETMPED ADAQIAAIDG
MDTAHSSARA DIDVGVPEPM TLYSATPEAL EETSHRPEMT SELRDGVVLL GQERSERFGV
EDGQVLEIEG SDGAVHELRV QVDANLQMSL VTPTTLEELV GDETRPVVLA DFADPGTPAR
EGVDALALMS SVEEVISGSD YSEASMVAGG TERESYAQIL QILLGITVAL LAVAVLVALV
GVANTLSLGV IERTGENALL RALGTTRRQM RAMLGWEGVL LALVGAVLGL VLGSVYGVLG
INALLSSTYP VTITIPWWQL ATVLVLAVVA GALASVLPGR AAARTAPAAA LADAD
|
|---|
| |