Gene Bfae_19380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_19380 
Symbol 
ID8400484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand- 
Start bp2176759 
End bp2177817 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content75% 
IMG OID644998001 
Productputative DNA-binding/iron metalloprotein/AP endonuclease 
Protein accessionYP_003155343 
Protein GI257069088 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0533] Metal-dependent proteases with possible chaperone activity 
TIGRFAM ID[TIGR00329] metallohydrolase, glycoprotease/Kae1 family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.311383 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCAGCA CCGCGAGCCC TGTCGTCCTG GGAGTCGAAT CCTCCTGCGA CGAGACCGGA 
TTCGGCATCG TCTCCGACGG CGTCCTGCTC GGGCAGGGGC TCGCCTCGAG CGCCGCGCAG 
CACGCCGACT TCGGGGGAGT GGTCCCCGAG ATCGCGGCGC GCGCGCACCT GGAGGCCGTG 
GTCCCCACGC TCCGGATCGC GCTCGACGAC GCCGGCGTCG AGCTCTCCGA CATCTCGCAC 
GTCGCGGTCA CCTCCGGGCC CGGGCTGGCG ACCGCCGTGC ACGTGGGGCT CGCCGCGGCG 
AAGTCCATCG CCTGGTCCCT CGGCGCGCCG CTGTACGGCG TCCACCACCT CGCCGGGCAC 
GCCGCCGCCG ACACCCTCGA GCACGGCCCG CTGCCCGAGC GCAGCATCGT GCTCATCGTC 
TCCGGCGGGC ACACCTCGAT ACTCGCCATC GGCGACCTGG TGCGCGACCC GATCGAGCAC 
CTCGGCGACA CCCTGGACGA CGCCGCCGGC GAGGCCTTCG ACAAGGTCGC GCGGCTGCTG 
GGGCTCGGCT ATCCGGGCGG TCCCGCGATC TCCCGCGCCG CCGTGGACGG CGACCCCACC 
GCGTACTCCT TCCCCCGCGC CATGCTGCGG CCGAAGGACG CGCCGTACAC CTTCTCCTTC 
TCCGGGCTCA AGACCGCCGT CGCCCGCACC GTCGAGACGC TCGAGCGGGC CGGCGAGCCG 
GTCCCGGTCG CGGACATCGC CGCCTCCTTC GAACAGGCCG TGGTGGACGT GCTGGTCACC 
AAGTCGCTCC GGGCGGTGCG CGAGCGCGCC CTGGACACCC TGGTGATCGT CGGCGGCGTC 
GCGGCCAACG CCCGCCTGCG CGCCGTCGCG CAGGAGAAGT GCGAGGCCGC CGGCATCACG 
CTGCGCATCC CGCCGCCGCG GCTGTGCACC GACAACGGGG CGATGATCGC CGCGGTCGGC 
GACCTGCTGG TGCGCTCGGG CGCCGAGCCC AGCGGACTGC GCATCGCCGC AGACCCCTCG 
GCCGTGCTCC ATGGCGCCCA GCTGCCCCTG CCGCGGTGA
 
Protein sequence
MTSTASPVVL GVESSCDETG FGIVSDGVLL GQGLASSAAQ HADFGGVVPE IAARAHLEAV 
VPTLRIALDD AGVELSDISH VAVTSGPGLA TAVHVGLAAA KSIAWSLGAP LYGVHHLAGH 
AAADTLEHGP LPERSIVLIV SGGHTSILAI GDLVRDPIEH LGDTLDDAAG EAFDKVARLL 
GLGYPGGPAI SRAAVDGDPT AYSFPRAMLR PKDAPYTFSF SGLKTAVART VETLERAGEP 
VPVADIAASF EQAVVDVLVT KSLRAVRERA LDTLVIVGGV AANARLRAVA QEKCEAAGIT 
LRIPPPRLCT DNGAMIAAVG DLLVRSGAEP SGLRIAADPS AVLHGAQLPL PR