| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_18750 |
|---|
| Symbol | |
|---|
| ID | 8400421 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | - |
|---|
| Start bp | 2097484 |
|---|
| End bp | 2099112 |
|---|
| Gene Length | 1629 bp |
|---|
| Protein Length | 542 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644997938 |
|---|
| Product | putative alpha-isopropylmalate/homocitrate synthase family transferase |
|---|
| Protein accession | YP_003155281 |
|---|
| Protein GI | 257069026 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
|---|
| TIGRFAM ID | [TIGR00977] 2-isopropylmalate synthase/homocitrate synthase family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.834015 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCC ACGCCGCGCC CACCGCGCCG ATCAGCGCCT TCCACCTCTA CGACACCACG
CTGCGCGACG GCTCCCAGCA GGAGGGCCTC ACGCTGTCGG TCGCCGACAA GCTCGCCGTC
GCCCGGCATC TCGACGAGCT CGGCGTCACC TACATCGAGG GCGGGTGGCC CGGTGCCGTC
CCGCGGGACA CGGAGTTCTT CGCCCGCGCC GCCGGTGAGC TCGAGCTGCA TCACGCCCGG
CTCGCGGCCT TCGGCGCGAC CCGCAAGGCG GGCGTCGCGG TGCAGGAGGA TCCGCAGGTC
GCCGCGCTCG TCGACTCCGG CGCCCCGACG ATCACTCTCG TGGCCAAATC GGATCTGCGA
CACGTCACCG GTGCGCTGCG CACCACCGGC GAGGAGAACC TCGCCATGGT GGGGGAAACG
GTCGCGCACC TCGTGTCCCT CGGCCGCGAG GTGTTCGTCG ACGCCGAGCA CTTCTTCGAC
GGCTTCCTCC ACGACCCCGA CTACACCACG TCGGTGCTGC TGGCCGCGCA TCGGGCCGGC
GCCGGGGTGC TGGTGCTGTG CGACACCAAC GGCGGGATGC TCCCGCACCA GGTCACCGAG
ATCATCGAGG ACCTCCGCGC CCGCCTGGCA CGGGCCGGTG CGGCCGATGC GCGGCTCGGC
GCGCACACCC ACAACGACAC CGGCTGCGCG GTGGCCAACG CCCTCACCGC GGTGCGCGCG
GGGATCACCC ACGTCCAGGG ATGCATCAAC GGGTACGGGG AGCGCACCGG CAACGCCGAT
CTGGTGACCC TCCTGGCCGA TCTGCAGCTG AAGATGGGCA TGGAGCTGCT GCCCGCCGAG
ACCCTCTCCG AGACCACCCG GATCGCGCAC GCGATCGGGG AGATCGTGAA CATGCCGGTG
GGGTCCCGGG CCCCGTACGT GGGGGCGAGC GCCTTCGCGC ACAAGGCCGG CCTGCACGCG
AGCGCGATCC GCGTCGACCC CGACCTGTAC CAGCACACCG ACCCGCAGCA GCTGGGCAAT
GACATGCGGA TGATCATCTC CGACATGGCC GGCCGCGCCT CGATCGAGCT CAAGGGCCGC
GAGCTGGGCT TCGACCTCGC GGGGGAGCCC GAGCTCCTCT CGCGCCTCGC GGCGACCGTC
AAGGAGCGCG AGGCGGTGGG CTACTCCTAC GAGGCGGCCG ACGCCTCCTT CGAGCTGCTG
CTGCTGGACC ACCTGGACCA GGTGCCCAGC TACTCGACCG TCGAGTCATG GCGGGCCACC
TCCCAGCTGG GCCGGGACGG CACCCTCGAG AGCGAGGCGA CGGTCAAGCT GCTCGCCGAC
GGCGACGGCG CGCACGAGCG GAAGGTCGCG ATCGCCGAGG GCAACGGGCC GGTCAACGCC
CTGGACCTCG CGCTGCGCGC GGCGCTGCGC GACCGTCACC CCGAGGTCGA CGAGTTCGAG
CTGCGCGACT TCAAGGTGCG CATCCTCGAC GCCCACCACG GCACGGACGC CACCACCCGC
GTGCTGGTGC GCACCTCCGG GCGGGGGCTG GAGTTCCAGA CCGTGGGCGT GGGCCCCAAC
GTCATCGAGG CCTCCTGGGA GGCGATCTAC GACGCGTACA CCTACGGGCT GTTCAAGTCC
GGGGTCTGA
|
|---|
| Protein sequence | MTTHAAPTAP ISAFHLYDTT LRDGSQQEGL TLSVADKLAV ARHLDELGVT YIEGGWPGAV
PRDTEFFARA AGELELHHAR LAAFGATRKA GVAVQEDPQV AALVDSGAPT ITLVAKSDLR
HVTGALRTTG EENLAMVGET VAHLVSLGRE VFVDAEHFFD GFLHDPDYTT SVLLAAHRAG
AGVLVLCDTN GGMLPHQVTE IIEDLRARLA RAGAADARLG AHTHNDTGCA VANALTAVRA
GITHVQGCIN GYGERTGNAD LVTLLADLQL KMGMELLPAE TLSETTRIAH AIGEIVNMPV
GSRAPYVGAS AFAHKAGLHA SAIRVDPDLY QHTDPQQLGN DMRMIISDMA GRASIELKGR
ELGFDLAGEP ELLSRLAATV KEREAVGYSY EAADASFELL LLDHLDQVPS YSTVESWRAT
SQLGRDGTLE SEATVKLLAD GDGAHERKVA IAEGNGPVNA LDLALRAALR DRHPEVDEFE
LRDFKVRILD AHHGTDATTR VLVRTSGRGL EFQTVGVGPN VIEASWEAIY DAYTYGLFKS
GV
|
|---|
| |