| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_18500 |
|---|
| Symbol | |
|---|
| ID | 8400396 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | - |
|---|
| Start bp | 2071092 |
|---|
| End bp | 2072207 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644997913 |
|---|
| Product | D-alanine--D-alanine ligase |
|---|
| Protein accession | YP_003155259 |
|---|
| Protein GI | 257069004 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
|---|
| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.384065 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAACCA CCGTCGCCCT CCTGTTCGGC GGCCGCAGCG GCGAGCACGG CATCTCGTGC
GTCACCGCCG GCGGCATCCT CGCCGCGATC GATCGCGAGC GCTTCGAGGT GATCGCCCTC
GGCATCACCC GCGAGGGCCG CTGGCTGCAC GTCTCCGACG ACCCCAGCGA CTGGACCCTG
GTCGACGGGC GCGCCCCGGA GATCGATCCC AGCGGCAACG AGGTGCTGCT GCCGCACTCG
CGCCACCGCC CGGGCGAGCG GATCACGCTG CGCACCGTGC GCGACGGCTT GATCCAGGAC
CTCGCGGACG TCGACGTGTT CTGGCCCCTC CTGCACGGCG TGTACGGGGA GGACGGGACC
GTCCAGGGCA TGCTCGAGAT GCTCGACATC CCCTACGTGG GCAGCGGGGT GCTCGCCTCC
GCCGCCGCGA TGGACAAGGC GGCCACGAAG CTCGTGCTGC GCGCCGCCGG GCTCGACTGC
GCCCCCGGCA TCGTGGTGCA CGAGGACCGC TGGGCGGAGG AATCGCACCG CGTGGCCACC
TACCTGCGCC GGAACCATCC GCTGCCCTGG TTCGTCAAGC CCGCTCGGGC CGGCTCGAGC
CTCGGCGTGA CCCGGGTGAC CGATCCCGCA CAGCTCGAGG CCGCGATGAA GGAGGCCTTC
GCCGAGGACC CCAAGGTGCT CGTCGAGGAG GGGCTGGACG CGCGCGAGGT CGAGTGCGGG
GTGCTCCAGG GCGCGGATCG CCAGGAGCCG AGCACCACGC TGCCCGGCGA GGTGAAGGTG
GGCCGGGACC TCGAGTTCTA CGACTACGAG GCGAAGTATT TCGGCAAGGG CACGGTGAGC
ATCGACGTGC CCGCGGCGCT GCCTGACGCC GTGCTCGAGG AGGTCCGCGA GACCTCCTGC
CGCGCCTTCC GCGCGCTCGG GCTCGAGGGC CTGGCACGGG TGGACATGTT CGTCACCTCC
GATCATCGGG TGCTCATCAA CGAGGTCAAC ACGATGCCCG GCTTCACCCC GTACTCGATG
TTCCCGGTGC TGTGGGAGAA CATGGGCCTC AGCTACGCGG ATCTCATCGC GGAGCTGATC
GAGCAGGCCC GCTCCCGGCG TCTCGGCGCG CGCTGA
|
|---|
| Protein sequence | MRTTVALLFG GRSGEHGISC VTAGGILAAI DRERFEVIAL GITREGRWLH VSDDPSDWTL
VDGRAPEIDP SGNEVLLPHS RHRPGERITL RTVRDGLIQD LADVDVFWPL LHGVYGEDGT
VQGMLEMLDI PYVGSGVLAS AAAMDKAATK LVLRAAGLDC APGIVVHEDR WAEESHRVAT
YLRRNHPLPW FVKPARAGSS LGVTRVTDPA QLEAAMKEAF AEDPKVLVEE GLDAREVECG
VLQGADRQEP STTLPGEVKV GRDLEFYDYE AKYFGKGTVS IDVPAALPDA VLEEVRETSC
RAFRALGLEG LARVDMFVTS DHRVLINEVN TMPGFTPYSM FPVLWENMGL SYADLIAELI
EQARSRRLGA R
|
|---|
| |