Gene Bfae_18020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_18020 
Symbol 
ID8400348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand- 
Start bp2024740 
End bp2025771 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content73% 
IMG OID644997865 
ProductABC-type dipeptide/oligopeptide/nickel transport system, permease component 
Protein accessionYP_003155212 
Protein GI257068957 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.318442 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCCTCT CGAACCCCGA ACCCGTCGGC GAGGGCGATC CCGGCGCGAC CGGCCTGGCC 
GCCGAGGCCA GCCAGGTGGC CGAGCGCCGC CGCGCGCCCT GGTACCTGCG CCTGCCGATC 
CTCAGCCACC TGCGCAGCAG CGTCGGCCTG CAGCGGGGCA TGCTCGTCAC CGGCCTGGTG 
CTGGTCGGCC TCCTGCTGCT CACCGCCCTG CTGGCGCCGC TGCTGGCGCC CCACGGCTTC 
GCCGACACCG GGTCCGACGG GGTGCGCTTC GGCACCCAGC AGCCGCCGTC GGCCGCCCAC 
CCCCTGGGCA CCACCGTCAC CGGCTTCGAC GTGCTCTCGC GCGTGATCTG GGGGACCCGC 
ACCGCGGTCG CCGTGATGGC CTGCGCCGTC GCCGCCTCGC TGTTCATCGG CGTGGCGATC 
GGGCTGGTGT CCGGCTACGT CGGCGGGTGG CTGGACCGGG TGCTGGTGAT GGTGGCCGAT 
GCGATCTACG CCTTCCCCTC CCTGCTGCTC GCGATCGTGA TGTCGATCGT GATCTCCGGC 
GGGCAGTCCG ACGCCTGGGG CGGCATCCTC GCCGCCGCCC TGTCCATCAC GGTGGTGTTC 
ATCCCGCAGT ACTTCCGGGT CACCCGCGCC GAGGTGGTGC GGCTGAAGGC CGAGCCGTTC 
GTCGAGGCGG CGAAGGTGGT GGGCACCGGG CACCGCCGCA TCATGGGCAC CCACCTGCTG 
CGCAACGCCA CCCGCACCCT GCCGCTGATC TTCACCCTCA ACGCCTCCGA GTCCATCCTC 
ACCCTGGCCG CGCTCGGCTT CCTCGGCTTC GGCATCGAAC CCACCAGCGC CTCCGAGTGG 
GGGTACGACC TCAACCGGGC GATGGCCGAC GCGACCAGCG GGATCTGGTG GACGGGCATG 
TTCCCGGGCC TCGCGATCGC GCTCGCCGTG CTCGGGGTGA CCCTCGTGGG CGAATCCGTC 
AACGATCTCA ACGACCCCCG CCTGCGCACC CGGCGCAGCC GGCGTCGCGC CCGGAAGGAG 
GCGGCCTCAT GA
 
Protein sequence
MTLSNPEPVG EGDPGATGLA AEASQVAERR RAPWYLRLPI LSHLRSSVGL QRGMLVTGLV 
LVGLLLLTAL LAPLLAPHGF ADTGSDGVRF GTQQPPSAAH PLGTTVTGFD VLSRVIWGTR 
TAVAVMACAV AASLFIGVAI GLVSGYVGGW LDRVLVMVAD AIYAFPSLLL AIVMSIVISG 
GQSDAWGGIL AAALSITVVF IPQYFRVTRA EVVRLKAEPF VEAAKVVGTG HRRIMGTHLL 
RNATRTLPLI FTLNASESIL TLAALGFLGF GIEPTSASEW GYDLNRAMAD ATSGIWWTGM 
FPGLAIALAV LGVTLVGESV NDLNDPRLRT RRSRRRARKE AAS