Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bfae_17950 |
Symbol | |
ID | 8400341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brachybacterium faecium DSM 4810 |
Kingdom | Bacteria |
Replicon accession | NC_013172 |
Strand | + |
Start bp | 2014028 |
End bp | 2015593 |
Gene Length | 1566 bp |
Protein Length | 521 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644997858 |
Product | drug resistance transporter, EmrB/QacA subfamily |
Protein accession | YP_003155205 |
Protein GI | 257068950 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0956578 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCTCCC CCGATCACAC AGCCTCCCCG GCGGCCTCCG CCGACCGTGA TCCGCGCCTG GACCGTCCCT GGCCGGCCCT GTGGTCGATC GTGCTGGGCT TCTTCATGAT CCTCGTGGAC ACCACGATCG TCACGGTCGC GATCCCGCGC ATGCAGCAGG ACCTCGACAC CGACCTGACG AGTCTGCTGT GGGTCACCAG CGCGTACCTG CTCGCCTACG CCGTGCCGCT GCTGATCACC GGGCGGCTCG GGGACCGCTA CGGGCTCAAG GCCGTGTACA TGGTGGGGTT GGTGGTGTTC ACCGCCTCGA GCCTGTGGTG CGCGCTGGCC GGTGACGTCG GGATGCTGAT CGTGGCTCGG GTGGTGCAGG GGCTCGGGGC CGGTGTGATG ACCCCGCAGA CGATGTCGAT GATCACCCGG ATGTTCTCCC CGCAGCAGCG GGGGCGGGCG ATGGCGCTGT GGGGTGCGAC GGCGGGCGTG GCCAGCCTCG TGGGACCGCT GCTCGGCGGG GTGCTCGTGG ACGGTCCCGG CTGGGAGTGG ATCTTCCTGG TCAACGTGCC CGTCGGGATC CTCACGCTGC TGCTCGTGCA GCGGAACGTG CCGCGATTCT CGCGCCGGGC CCACTCCTTC GACTGGCTCG GGGTCGTGCT CTCCGCGATC GGGCTGTTCC TGCTGGTGTT CGGGATCCAG GAGGGCAACA CCTACGACTG GGGCAGGATC ACCGACTCGC TGCGGATCGG CCCGCTCGAG ACGGGCATGC CGGTCAGCGT GCCGGGTCTG ATCATCGCGG GAGTGGTGGC GCTCGTGGTC TTCGTCGTCT GGCAGGCGCG GAACCGTCGC GAGCCCCTGG TGCCGCTGTC GCTCTTCCGC GATCGCAACT TCTCGGTCGC GAGCCTCGCG ATCGCGATGA TGGGCGCGAC CGTGCTCACC CTCGCGATCC CCGCCACGCT GTTCTTCCAG CAGGTGCTCG GCATGACTCC CACGCAGGCG GCGCTCATGA CCGCCCCGAT GGCGGTGGTC TCGCTGGTCC TGGCCCCGCC CGTCGGCCGC TGGATGACGC TCCACGACCC GCGCTGGATG GCGCTGGGCG GCTTCGCCTC GCTGGCCGGC GGTCTGCTGT GGCTCTCCCG CCTCATGACG CCGGAGACCC CGTTCGTGCT GCTCCTGCTG CCGTTCCTGC TGGTCGGGCT CGGCAACGCC TTCGTCTGGG GGCCGCTGTC CCTCACCGCG ACGCGCAATC TGCCGCCCTC CCTCGCCGGG GCGGGCTCCG GGGTGTACAA CGAGACCCGC CAGATCGGGT CCGTGCTGGG GTCGGCGGCG ATCGCGACCC TCGTGAGCGA CCGCCTCGCG GCGCGGATCG GCGAGGCGAC CGGCGGCGCC GGCGGCACGG CCCCGGCAGG AGCCGAGGGC GGCACGGGCA CGCTGCCCGA GGCGCTTCAT GCGCCGTACG CCGCGGCGAT GAGCGATGCG ATGCTCCTGC CCGTCGGCCT CGCCGCCGTC GGGGTGCTCG CCGCGCTGCT GATCGGCAAG CCCGTGGACA CCGGGGTGTG GGCGCGGGAC GAGTGA
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Protein sequence | MPSPDHTASP AASADRDPRL DRPWPALWSI VLGFFMILVD TTIVTVAIPR MQQDLDTDLT SLLWVTSAYL LAYAVPLLIT GRLGDRYGLK AVYMVGLVVF TASSLWCALA GDVGMLIVAR VVQGLGAGVM TPQTMSMITR MFSPQQRGRA MALWGATAGV ASLVGPLLGG VLVDGPGWEW IFLVNVPVGI LTLLLVQRNV PRFSRRAHSF DWLGVVLSAI GLFLLVFGIQ EGNTYDWGRI TDSLRIGPLE TGMPVSVPGL IIAGVVALVV FVVWQARNRR EPLVPLSLFR DRNFSVASLA IAMMGATVLT LAIPATLFFQ QVLGMTPTQA ALMTAPMAVV SLVLAPPVGR WMTLHDPRWM ALGGFASLAG GLLWLSRLMT PETPFVLLLL PFLLVGLGNA FVWGPLSLTA TRNLPPSLAG AGSGVYNETR QIGSVLGSAA IATLVSDRLA ARIGEATGGA GGTAPAGAEG GTGTLPEALH APYAAAMSDA MLLPVGLAAV GVLAALLIGK PVDTGVWARD E
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