Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bfae_17420 |
Symbol | |
ID | 8400288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brachybacterium faecium DSM 4810 |
Kingdom | Bacteria |
Replicon accession | NC_013172 |
Strand | - |
Start bp | 1947711 |
End bp | 1948550 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644997806 |
Product | competence protein ComEA-like protein with helix-hairpin-helix repeat region |
Protein accession | YP_003155153 |
Protein GI | 257068898 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1555] DNA uptake protein and related DNA-binding proteins |
TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region [TIGR01259] comEA protein |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.711078 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAGCTC ATCCAGGGTC CGAGGGGTCG CGGCGAGGCC GCGCCGGGAG GCATCGCCGC ACCGGCCAGG CGCTGATCAC GCGGCGCGAC CACACCGCGG AGACCCCGGC CCGCCGCTTC ACGCTGCCCG CCCCCTCGCC GTCGGCGCTG GTGGGGATCG CCGTGCTCGT GCTCATCGCC GTCGGCGCGG TGCACCTCTC GGGCTCCGGC TCCGCAGTGC CGCTGGAGGA GGCGAGTCCC CAGGAGATCA CCGACGGGAC CTCACCGAGC ACCGGAACGC CCTCCGCGAA CGAGCCCACC GAGGTGGCCG AGGTGGCCGA GACCACTGAG ACCACGGAGG GCGCCGCAGC GGGGGCGGCA CCGGAGGACG GCGCCTCCGA CGAGCTGATC GTCCACGTCT CCGGAGCGGT CGCCGCACCG GGAGTGGTGC ACCTGCCCGG CGGCGCCCGG GTCGATGACG CGCTGCGCGC CGCCGGCGGG GCGACGGAGG AGGCCGAGCT CGCGGCCGTG AACCTCGCCC GTCCCCTCGT CGACGGCGAA CAGATCCACG TCCCCCTGCC CGGCGAACAG CCACCGCCCG CGGAGGACGG CCCGGCCGCG CCGCCGGGCG GCGGCGAGGG AAGCGGCCCG CCCGGCACGG ACGCCGGCGG AGCGATCGAT CTGAACACCG CGGGCGCGGC CGAGCTCGAG GAGCTGCCCG GCGTGGGCCC CGCCATCGCC CAGCGCATCC TCGAGCACCG GGAGAAGAAC GGCGCCTTCA CCTCGGTGGA CGGCCTCCTC GAGGTCTCCG GCATCGGGCC CGCCACCCTC GAGAAGATCC GTGCAGAGGC CACCGTATGA
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Protein sequence | MGAHPGSEGS RRGRAGRHRR TGQALITRRD HTAETPARRF TLPAPSPSAL VGIAVLVLIA VGAVHLSGSG SAVPLEEASP QEITDGTSPS TGTPSANEPT EVAEVAETTE TTEGAAAGAA PEDGASDELI VHVSGAVAAP GVVHLPGGAR VDDALRAAGG ATEEAELAAV NLARPLVDGE QIHVPLPGEQ PPPAEDGPAA PPGGGEGSGP PGTDAGGAID LNTAGAAELE ELPGVGPAIA QRILEHREKN GAFTSVDGLL EVSGIGPATL EKIRAEATV
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