Gene Bfae_17300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_17300 
Symbol 
ID8400276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp1933442 
End bp1934452 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content72% 
IMG OID644997794 
Productheat-inducible transcription repressor HrcA 
Protein accessionYP_003155141 
Protein GI257068886 
COG category[K] Transcription 
COG ID[COG1420] Transcriptional regulator of heat shock gene 
TIGRFAM ID[TIGR00331] heat shock gene repressor HrcA 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGACA CGGACGCCCG CAAGCTCCAC ATCCTCGGCG CGATCGTCGA GGATTACGTC 
GCCACCCGCG AGCCCGTCGG CTCCAAGTCG CTCCTGGAGC GGCACGAGCT CGGCGTCTCC
GCCGCGACCG TGCGCAACGA CATGTCGCTG CTCGAGGAGG AGGGGCTGAT CCATCAGCCG
CACACCTCGG CCGGGCGGGT CCCCACCGAC AAGGGGTACC GCACCTTCGT CGACCACGTG
GCGACCGTCA AACCTCTCTC GGCTCCCGAG CGCCGCGCGA TCCGCGCCCT GCTCGAGGAT
GCCGGTGACG TCGAGGAGCT CCTCAGCCGC ACCGTGCGGC TGCTGGCGCA GACCACCCAG
CAGGTGGCGA TGGTCCAGTA CCCGGCGCGC CGCCAGGCCA GGATCCGCCA CGTCGAGCTG
GTGAAGGTGG CCGATTCGCT GCTGCTGGTG GTGCTGATCC TCGAATCCGG CAGGGTCGAC
CAGCGCACCG TCCCGGTGAT CGCGGGCATG CCCGCCGAGT ACTACGCCGG TCTGCGCGAC
CATCTCAACC GGGTCGTCGC CGGCCGTGAG GTCACCGATC TCGACGGCCC CCTCGCCGAC
TACCTCGAGT CGCTCTCGCT GCCCGAGCGC CCGGCCGCCG CCGAGGTGGC CGAGGCCCTC
GCAGCGCTGG CCGCGACCCG CGCCGAGGAC CGCATCATGA TGGCCGGGAC GGCGAACATC
GCCCGCTCCG CCCAGGACTT CGCGCGCGAC GTCGAGCCGC TGCTGGACGT GCTCGAGGAG
CAGCTGGTGC TGCTGCGCCT GTTCACCGAG ATGCACGTCT CGCCGGGCGC GGTGGAGGTG
CGGATCGGCT CGGAGCTCCG CGACCGGGCG CTGCAGCAGA CCGCCGTGGT CGGCGCCGGG
TACGGGGCCG GGTCCCATCT GGCGATCCTC GGCCCGCGCC GGATGGACTA CGCCACCGGC
ATCTCGACCG TCCAGGCCAT CGCCCGCTAC GTCTCCCGCT ATCTCGAATA G
 
Protein sequence
MSDTDARKLH ILGAIVEDYV ATREPVGSKS LLERHELGVS AATVRNDMSL LEEEGLIHQP 
HTSAGRVPTD KGYRTFVDHV ATVKPLSAPE RRAIRALLED AGDVEELLSR TVRLLAQTTQ
QVAMVQYPAR RQARIRHVEL VKVADSLLLV VLILESGRVD QRTVPVIAGM PAEYYAGLRD
HLNRVVAGRE VTDLDGPLAD YLESLSLPER PAAAEVAEAL AALAATRAED RIMMAGTANI
ARSAQDFARD VEPLLDVLEE QLVLLRLFTE MHVSPGAVEV RIGSELRDRA LQQTAVVGAG
YGAGSHLAIL GPRRMDYATG ISTVQAIARY VSRYLE