Gene Bfae_17160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_17160 
Symbol 
ID8400262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand+ 
Start bp1918416 
End bp1919006 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content79% 
IMG OID644997780 
Product2'-5' RNA ligase 
Protein accessionYP_003155127 
Protein GI257068872 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1514] 2'-5' RNA ligase 
TIGRFAM ID[TIGR02258] 2'-5' RNA ligase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0177806 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGGTGT TCGTCGCCCT CCGGCCCGCG CCCTCCGCGC TCGCGCACCT GGACGCGGCG 
CTCGAGGACG TCCGCGCCGG AGCGGGGCTC GCCCTGCGGT GGACGGATCC CGCGCAGTGG 
CATCTCACCC TCTCCTTCCG GCCCGATCTG CCCGCCGGGG CGCTCGAGGA CGCGCTCCAC 
GACCTCGCCG CGATCGCGGC CCGTCACCGG CCGCCGACGC TCCAGCTGAG CGGGGCCGGG 
GTGTTCGATG CCCGCACGCT GTGGATCGGC GTGGGAGGCG AGACCGCGCC GCTCGCGGCG 
CTGATGGGCG AGCCGCTGCT CGAGGGCGAG GGGCGGGAGC GGCGCCGCGC GCACCTGACC 
GTCGCGCGGG TCTCGGCCCG TGCTCCTCGC GCGCCGCGAC GGCGCCGGCG GGGCGACCCG 
CCGCCGCCGG ATCCCACCCG GCTCCTCCTC GCCGACGCCG TGCGGGCCCT GTCGGTCTAC 
CGGGGCCCGA GCTGGGAGGC GACGGAGCTC GAGCTCGTCT CCTCCGCGCT CGGCGAGGGA 
CGCTCGGGAG GGCCCCTCCA CGAGGTGCTC GCCACCGTCC CCCTGGGCTG A
 
Protein sequence
MRVFVALRPA PSALAHLDAA LEDVRAGAGL ALRWTDPAQW HLTLSFRPDL PAGALEDALH 
DLAAIAARHR PPTLQLSGAG VFDARTLWIG VGGETAPLAA LMGEPLLEGE GRERRRAHLT 
VARVSARAPR APRRRRRGDP PPPDPTRLLL ADAVRALSVY RGPSWEATEL ELVSSALGEG 
RSGGPLHEVL ATVPLG