Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bfae_16000 |
Symbol | |
ID | 8400147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brachybacterium faecium DSM 4810 |
Kingdom | Bacteria |
Replicon accession | NC_013172 |
Strand | - |
Start bp | 1802888 |
End bp | 1805773 |
Gene Length | 2886 bp |
Protein Length | 961 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644997666 |
Product | superfamily II RNA helicase |
Protein accession | YP_003155018 |
Protein GI | 257068763 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4581] Superfamily II RNA helicase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0348006 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCTCAC CCGCCGAGCG CTACGCCCAG TGGGCGCAGG AGAAGAAGCA GGCCGCCTCC GAGCTGACCG CCTTCACCGG CCGCTACCCC TTCGCCCTCG ACGACTTCCA GCTCGCCGCC GGACGGGCAC TGGAGAACGG CAGCTCCGTG CTGGTCGCCG CCCCCACCGG CGCCGGAAAG ACCGTGGTGG GCGAGTTCGC CGTGCACCTC GCCCTGGCCC GCGGGCACAA GGTGTTCTAC ACCGCGCCGA TCAAGGCGCT GTCGAACCAG AAGTTCGGCG AGCTCGTGGA CTGGCTGGGC GCGGAGCGGG TGGGGCTGCT CACCGGCGAC ACCTCGATCC GCCCGGACGC CGAGGTGGTC GTGATGACCA CCGAGGTGCT GCGCAACATG CTGTACGCGG ATTCGGACCT GCTCGTCGGC CTCGGCTTCG TGGTGATGGA CGAGGTGCAC TACCTCGCCG ATCGTCTGCG CGGGCCGGTG TGGGAGGAGG TCATCATCCA CCTGCACGAC TCGGTGCAGC TGGTCTCGCT CTCGGCGACG GTCTCCAACG CCGAGGAGTT CGGGGCCTGG CTGCAAGAGG TGCGCGGCAG CACCGAGATC ATCGTCTCCG AGACCCGCCC GGTGCCGCTG TGGCAGCACG TCGTGGCGGG GGAGGAGCTG CTGGACCTGT TCGTCGACGC CGACGGGCAG GCCGTCGTCT CCCACGGCCC GGGTGCCCGC GGCGAACGTC GGGTCAATCC CGAGATCGAG CGGATCACCT CCTTCTCCCT CCCCGTGGAC GAGCGCACCG GCGGGGCGCG GGGCCGCGGC TACCGCGGGC GCAAGGGCAC CCGCGGCCGG CATCGTCCGC GCGGTGCGGG CCGGCACCGC CCGCCGCACC GGGGCGGGGG CCGCGGGCGC GGCGGCCCGG AGCACGGCGG GGGTCTCCAG CGGCCGGCGC GCCGCACGGA GGTCGTCGAG CTGCTCGACG ACGCCGCGCT GCTGCCGGCG ATCATGTTCA TCTTCTCCCG CGCCGGCTGC GACGCGGCGG TGCAGCAGTG CGCCCGCGCG CGGCTGCGGC TCACCGACGA CGCCGAGCGC CGCGCGATCC GTTCCTACCT GGACGAGCAG CTCTCGGGCA TCGGCGTCGA GGACGAGGAG GTGCTCTCGC TGGCGACCTT CCGCCGCGCC GCCCTCGACG GCTTCGCCGC CCATCACGCC GGGATGCTGC CGCTGCTGAA GACGATCGTC GAGCAGCTGT TCGCCCGGGG CCTGATCAAG GTCGTCTTCG CCACCGAGAC CCTCGCCCTC GGCATCAACA TGCCGGCGCG CTCGGTGGTC CTCGAGAAGC TCGTCAAGTT CAACGGCGTC GATCACGCCG ACCTCACGCC GGGGGAGTTC ACGCAGCTGA CCGGCCGGGC GGGACGCCGC GGCATCGACA CCGAGGGGCA CGCGGTGGTG GTCGCCGGGC CGCGCTTCGA CGCCCGAGCG GTGGGCTCCC TCGCCTCCCG GCGCACCTAT CCGCTGCGCT CCGCCTTCCG CCCCACCCCG AACATGGCGG TGAACCTGCT GGAGCGCTTC GACCTCTCCC GCGCCCGGGA GACCCTCGAG ACGAGCTTCG CCCAGTTCCA GGCCGACCGC TCCGTGGTGG GCCTGGCGCG CCGGGCCCGC GAGCTCGAGG ACACCGTCGC CTCCTACCGC GAGGCGATGA CCTGCGAGCA CGGGGACCTG CTCGAGTATG CCCGGCTCCA GGAGGCGGTC GCCGAGCGGG AGAAGACCCT GGCCCGGGAG CGGTCCGAGG CGGACCGTGC ACGCACCCGC AGCATGCTCG GCGACCTCCG CCGCGGCGAG GTGCTCGCCC TGCCGGGCGG GAAGCGCCGC GGCTACGCGG TGGTGCTGGG CGTGGACCGG AACGTGCTCG GCGGCCCGCA GGTCGATCTG CTGGACACCG AGGGGCGGCG CCGCATCCTG CGCCCCGGGG ACGTGCCCTC CCCACCCGCC GTGATCGACA CGCTGCGCCT GCCCCGCCAG GACACCCTCG GCAGCGGAAA GGTGCGCAGG GACACCGCCG CCGCGCTGCG CCAGCGGCTC GCGGGGCAGG ACGACGATGC GCGCCGCGAG GTGCGACGCC GCGCCGGGCG CACCCCCTCG ACAGCCGCGA CCGACGAGCA GCTGCTCGCC CTGCGCGCCG AGCTCACCGC CCACCCCTGC GCCCAGTGCC CGGACCTCGA GTCGCATCTG CGCTGGGTGG GACGCTGGCG CAAGTCCCGG AGCGAGCTCG AGGGCGTGCA GCGACGCATC CGCGGCCGCA CCAGCTCCCT GGCCCGTCAG TTCGACCACC TCGCCGATCT GCTCGTCGAG CTCGGATACC TCGAGCGCGT CGACGCCGGG ACGGAGGACG AGGAGCTGCG GCCCACCGCG AGCGGGCTGC GGCTGCGGCG GCTGTTCAGC GACCGCGACC TGCTCATCGC GCAGTGCCTC GAGCACGGCG CCTGGGCGGA CCTGGACCCG GCCGGTCTCG CGGCCGTCGT CTCCGCCGCG GTCCACGAGT CGCGCCGTGA CGACCGGGCG CCGGAGCTGA TCCCGGATCC CGCGGTCGAG GCCGCGCTCG AGGCCTCGAC CCGGGTGGCG ACCGCGCTGC AGGCCGCCGA GGCCCGGCAC CGCATCAGCC CCACCACCGC CCCCGACCCG GCGATCGCCG CGATCGTGCA CCGCTGGGCG CGCGGGGCGC ATCTCGCGGC GGCGCTCGAG GGGAACGATC TGCCCCCGGG GGACTTCGTG CGCCACTGCC GCCAGGTGAT CGACCTGCTC GACCAGCTCA CCGCCGATGA GGAGCTGGGC CCGATCGCCC GGCGCGCGAT CCGTGCGGTG CGCCGCGGCC TCGTGGCCCA GGAGATCGAT CGATGA
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Protein sequence | MTSPAERYAQ WAQEKKQAAS ELTAFTGRYP FALDDFQLAA GRALENGSSV LVAAPTGAGK TVVGEFAVHL ALARGHKVFY TAPIKALSNQ KFGELVDWLG AERVGLLTGD TSIRPDAEVV VMTTEVLRNM LYADSDLLVG LGFVVMDEVH YLADRLRGPV WEEVIIHLHD SVQLVSLSAT VSNAEEFGAW LQEVRGSTEI IVSETRPVPL WQHVVAGEEL LDLFVDADGQ AVVSHGPGAR GERRVNPEIE RITSFSLPVD ERTGGARGRG YRGRKGTRGR HRPRGAGRHR PPHRGGGRGR GGPEHGGGLQ RPARRTEVVE LLDDAALLPA IMFIFSRAGC DAAVQQCARA RLRLTDDAER RAIRSYLDEQ LSGIGVEDEE VLSLATFRRA ALDGFAAHHA GMLPLLKTIV EQLFARGLIK VVFATETLAL GINMPARSVV LEKLVKFNGV DHADLTPGEF TQLTGRAGRR GIDTEGHAVV VAGPRFDARA VGSLASRRTY PLRSAFRPTP NMAVNLLERF DLSRARETLE TSFAQFQADR SVVGLARRAR ELEDTVASYR EAMTCEHGDL LEYARLQEAV AEREKTLARE RSEADRARTR SMLGDLRRGE VLALPGGKRR GYAVVLGVDR NVLGGPQVDL LDTEGRRRIL RPGDVPSPPA VIDTLRLPRQ DTLGSGKVRR DTAAALRQRL AGQDDDARRE VRRRAGRTPS TAATDEQLLA LRAELTAHPC AQCPDLESHL RWVGRWRKSR SELEGVQRRI RGRTSSLARQ FDHLADLLVE LGYLERVDAG TEDEELRPTA SGLRLRRLFS DRDLLIAQCL EHGAWADLDP AGLAAVVSAA VHESRRDDRA PELIPDPAVE AALEASTRVA TALQAAEARH RISPTTAPDP AIAAIVHRWA RGAHLAAALE GNDLPPGDFV RHCRQVIDLL DQLTADEELG PIARRAIRAV RRGLVAQEID R
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