| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_15740 |
|---|
| Symbol | |
|---|
| ID | 8400121 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | - |
|---|
| Start bp | 1774085 |
|---|
| End bp | 1777510 |
|---|
| Gene Length | 3426 bp |
|---|
| Protein Length | 1141 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644997640 |
|---|
| Product | DNA polymerase III, alpha subunit |
|---|
| Protein accession | YP_003154992 |
|---|
| Protein GI | 257068737 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0587] DNA polymerase III, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.129252 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCGCT GGTTCCTGGG CCCGCCCTCG TGGAAGGACC TCGAGGCGAT CCTCTCGGAT
CGTCCCGCCG AGCTGGCCCC GCCACCGGTC GTCGTCGAGC ACACCGGGCA GCATGCCGAG
GAGACCTACC GGCCCGGCCG CGCCGTCGAC TACGCCGAGC TGCACGCCCA TTCCCACTTC
AGCTTCCTCG ACGGCGCCTC GAGCCCCGAG GACATGGCCG GGCAGGCCGC CCGGCTGGGG
CTGGGAGCGA TCGCCCTGGT GGATCACGAC GGGCTGCCCG GCGCGGTCCG CTTCGCGACC
GCCGCGGCGG AGGCGGGCAT CGCCACCGTG TTCGGGGCGG AGCTGAGCCT GGGGCTCGAG
CCCGGGGCGG TGACCGCCAG CAGCACCCCG GTCGTCTCCG CGCCCCGCAC CGGGGTCCCG
GATCCGGACG GCGAGCACCT GCTGGTGCTG GTGCGCGACA CCGCCGGCTA CCGGCAGCTC
TCCGCCGCGA TCGCCCGCGC CCACCTCGAC AGCAGGCAGA AGGGGGTGCC GCGCTACCGG
CTCGCCGAGC TCTCGCGCCT CGCCCGCGAA GGGCACTGGC TGATCCTCAC CGGCTGTCGC
AAGGGAGCGG TGACCCGTGC CGCGGCCGAG CACCTCGAGG CCGGGGACCT CGACGCGGCA
GCTCACGCCG CCGCAGCGGC GATCACCCGC CTGGTGGAGC TGTTCGGTCC CGGGAACGTG
GCCGTCGAGC TGATGGTCGG CGGCGGGGGA GAGGCGGATG AGCTGCATGA CGCGCTCGCC
CAGGGTGCCC GCCTTGTGCG CGAGAGCCAC GGCCTGGACG AGATCTCCCT GCCGCTGGTG
GCCAGCACCA ACGCCCACTA CGCCCGCCCG TCGGACCGGC GCCTCGCCGA CACCCATGCC
GCGCTGCGTG CCGGGGTGCC GCTGGCCGAG GCCGATCCGT ACCTCTCCTC CCGCCCCGCG
CACCTGCGCA GCGGGGAGGA GATGGCGCAG CTGCTGCCCC GTTACCCGGG GGCGATCGCG
CAGGCCGCGA GGCTCGGCCG CGACTGCGCC CTGGACCTGC GCCTGCTCGC CCCGGATCTG
CCGCCCTTCC CGGTCCCGGC CGGGCACGAC GAGGCCAGCT GGCTGGTGGA GCTGGTGGAG
ATCGAGGGCC GGGAGCGCTA CGGGCCCCGG CCCACACCGG AGCGGCCCGA GCAGGTGCCG
GGGGCGTGGG CGCAGATCGA CCATGAGCTG AAGGTCATCA CCGATCTCCG CTTCCCCGGC
TACTTCCTGA TCGTCCACGA GATCGTCGAC TTCTGCGCCG GGGAGGGGAT CCTCGCGCAG
GGCCGGGGCT CGGCCGCGAA CAGCGCCGTC TGCTACGCGC TGGGCATCAC CGCGGTCGAG
CCCGTCGGCC ACCAGCTGCT GTTCGAGCGC TTCCTGGCCC CGGAGCGGGA CGGGCCGCCG
GACATCGACA TCGACATCGC CTCCGACCGG CGCGAGGAGG TGATCCAGCA CGTCTACGAG
CGCTACGGGC GGGAGAACGC CGCGCAGGTC GCCAACGTCA TCACCTACCG GGCGAAGCTC
GCGGTGCGCG ATGCCGCGCG GGCGCTCGGC TACGACACCG GCGCGCAGGA CGCCTTCGCC
AAACGGGTCG AGCGCTCCTT CAGCGCGCTG CGGGAGGCGG ACGTGCCGGG CGACGTGGTC
GAGCTCGCCC ACCGGCTGCG CGACGCGCCC CGCCATCTGG GCATCCACTC CGGCGGGATG
GTGCTGTGCG ACCGTCCCGT GATCGAGGTG TGCCCGGTGC AGTGGGCCGC GATGGCGGAC
CGCTCCGTGC TGCAATGGGA CAAGGACGAC TGCGCCGAGG CGGGTCTGGT CAAGTTCGAC
CTGCTGGGGC TGGGGATGCT CACGGCGCTC GACCACGCGC TGCGGATCAT CGCCGAGCAC
CACGGCCAGC ACTTCGAGCT GCACACCCTG CCGCAGGAGG ACCCCGCCGT CTACGACATG
CTGTGCGCCG GGGACAGCGT GGGCGTGTTC CAGGTGGAGT CCCGCGCCCA GATCTCCACC
CTGCCGCGCC TGCGGCCGCG CGAGTTCTAC GACCTGGTGG TGGAGGTGGC GCTGATCCGT
CCCGGCCCCA TCCAGGGCGG CTCCGTGCAC CCCTACATCC GGCGCCGGAA CAAGGAAGAG
CCGGTCACCT TCCTGCACCC GCGGCTGGAG AAGTCGCTCG GACGCACCCT GGGCATTCCG
CTGTTCCAGG AACAGCTGAT GCAGATGGTG GTCGACGTCG CCGATTTCAC CCCCGCCCAG
GCCGATCAGC TGCGCCGCGC GATGGGCTCC AAACGCTCCA CCCAGAAGAT GCTCGAGCTC
TCCGACGCCC TCTTCGCGGG GATGGCGGAG CACGGCATCG TGGGGGAGGA CGCCGAGGCC
GTCCACCGCA AGCTGCTGGC CTTCGCCAAC TACGGCTTCC CCGAGTCCCA CGCCTACTCC
TTCGCGTACC TGGTGTACGC GAGCTCGTAC CTGAAGTGCC ACTACCCGGC GGCGTTCACC
GCGGGGCTGC TGCGCTCCCA GCCGATGGGC TTCTACTCCC CGCAGTCGCT GGTCGCCGAC
GCCCGCCGGC ACGGCGTGCT CACCCGCGGG CCGGACGTGC TCGCCAGCCG TGCCCGCACC
GACCTGGAGA CCGATGCCGA GCATCGCGGA TACCGGATCG ACCCGCCGGG GGAGCAGATC
CAGGGCGAAG CTGCGGCACA GGGCCCGGCG ATCCGGCTGG GCCTGGACCA GGTGCGCGGG
ATCAGCACCG AGACCGCGGA GGAGATCGTG GCGGAGCGGG GACGCGGCGG ACAGTTCACC
TCCGTCCCGG ACCTCGCCCG CCGGGTGCGG CTGACCGCCC GTCAGCTGGA GGCGCTGGCC
ACCGCCGGGG CGCTGGACGC GCTGGCGAGC TCCCGCCGGC AGGCGCTGTG GGCCGCGGGC
GCCGCCGCCC AGGAATCCCC GGAGACCCTG CCGCACCTCG CGGTGGGGGC GCAGGCGCCG
ATGCTGCCGG GCATGAGCGA CGCCGAGATC GCCACCGCGG ACGCCTGGGC CACCGGCATC
ACCCTGGACG AGCACCCGAT GGCGCTCGTG CGCCAGGAGC TCACGGCCGA CGGGGTGCTC
GCGATCGCCG CCACCCGGGA GGCGGAGGAT TCGCGCCGGA TCCGGGTGGC CGGGGTGATC
ACCCACCGGC AGCGCCCGGC GACCGCCGGG AACGTCACCT TCCTCAGCCT CGAGGACGAG
ACGGGGATCC TCAACGTGGT CTGCTCCCAG GGGTTCTGGG TGCGGCATCG GGCCCTGCTG
CGCACCGCCC GGGCGATCGT GCTGCGCGGG ATCGTGGAGA ACCGCACCGG CGCGGTGAAC
CTGGTCGCCG ACGACGTCGC GTCCCTGGAC CTGGCCGCGG CCGGCCGGTC CAGGGACTTC
CGCTGA
|
|---|
| Protein sequence | MARWFLGPPS WKDLEAILSD RPAELAPPPV VVEHTGQHAE ETYRPGRAVD YAELHAHSHF
SFLDGASSPE DMAGQAARLG LGAIALVDHD GLPGAVRFAT AAAEAGIATV FGAELSLGLE
PGAVTASSTP VVSAPRTGVP DPDGEHLLVL VRDTAGYRQL SAAIARAHLD SRQKGVPRYR
LAELSRLARE GHWLILTGCR KGAVTRAAAE HLEAGDLDAA AHAAAAAITR LVELFGPGNV
AVELMVGGGG EADELHDALA QGARLVRESH GLDEISLPLV ASTNAHYARP SDRRLADTHA
ALRAGVPLAE ADPYLSSRPA HLRSGEEMAQ LLPRYPGAIA QAARLGRDCA LDLRLLAPDL
PPFPVPAGHD EASWLVELVE IEGRERYGPR PTPERPEQVP GAWAQIDHEL KVITDLRFPG
YFLIVHEIVD FCAGEGILAQ GRGSAANSAV CYALGITAVE PVGHQLLFER FLAPERDGPP
DIDIDIASDR REEVIQHVYE RYGRENAAQV ANVITYRAKL AVRDAARALG YDTGAQDAFA
KRVERSFSAL READVPGDVV ELAHRLRDAP RHLGIHSGGM VLCDRPVIEV CPVQWAAMAD
RSVLQWDKDD CAEAGLVKFD LLGLGMLTAL DHALRIIAEH HGQHFELHTL PQEDPAVYDM
LCAGDSVGVF QVESRAQIST LPRLRPREFY DLVVEVALIR PGPIQGGSVH PYIRRRNKEE
PVTFLHPRLE KSLGRTLGIP LFQEQLMQMV VDVADFTPAQ ADQLRRAMGS KRSTQKMLEL
SDALFAGMAE HGIVGEDAEA VHRKLLAFAN YGFPESHAYS FAYLVYASSY LKCHYPAAFT
AGLLRSQPMG FYSPQSLVAD ARRHGVLTRG PDVLASRART DLETDAEHRG YRIDPPGEQI
QGEAAAQGPA IRLGLDQVRG ISTETAEEIV AERGRGGQFT SVPDLARRVR LTARQLEALA
TAGALDALAS SRRQALWAAG AAAQESPETL PHLAVGAQAP MLPGMSDAEI ATADAWATGI
TLDEHPMALV RQELTADGVL AIAATREAED SRRIRVAGVI THRQRPATAG NVTFLSLEDE
TGILNVVCSQ GFWVRHRALL RTARAIVLRG IVENRTGAVN LVADDVASLD LAAAGRSRDF
R
|
|---|
| |