Gene Bfae_15030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_15030 
Symbol 
ID8400050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand+ 
Start bp1692877 
End bp1693959 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content72% 
IMG OID644997570 
Product3-dehydroquinate synthase 
Protein accessionYP_003154923 
Protein GI257068668 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0337] 3-dehydroquinate synthetase 
TIGRFAM ID[TIGR01357] 3-dehydroquinate synthase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0034705 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACCA CGGTCATCCC CGTGAGCACC CCGACCGGAG GCTACGACGT GCACGTCGGC 
CGCAGCCTGC TGGGCGAGCT GCCCGCCCTG CTGCCCGAGC ACGCCCGCCG GGTCGTCATC 
GTGCACCAGC CGAGCCTGCG CGATGTCGCG GAGCAGCTCC GCGCCGCGAT CGCCGAGAGC 
GACCGGCAGG CCTTCGCCGC CGAGATCCCC GACGGCGAGG AGGCGAAGAC CGCCCAGGTC 
GCCGGCTTCC TCTGGGGCGT GTGCGGGCAG GCCGAGATCG GCCGCAAGGA CCTGGTGATC 
GGGCTCGGCG GCGGTGCCGC CACCGATCTC GCCGGCTTCG TCGCGGCCTC GTGGCTGCGC 
GGCGTGGACG TGCTGCAGGT GCCCACCACC GTCGCCGCGA TGGTGGATGC GGCCGTGGGC 
GGGAAGACGG GCATCAACAC CGCCGAGGGG AAGAACCTCG TCGGCGCCTT CCACCCGCCG 
ATCGCCGTCG TCGCCGATCT CGACGTGCTC GGCGCCCTGG GCGCGAACGA GGTCGCCGCA 
GGGCTCGCCG AGGCCGTGAA GGCCGGGTTC ATCGAGGACA CCGCGATCCT CGACATCGTC 
GAGCGGGATC CGGCGGCGGT GCTCGACGTC ACCACGGACC AGTTCCGCGT GGTGATCGAG 
AGGGCGATCC GCGTCAAGGC GCGCGTCGTC TCCGCGGACC TGCGGGAATC GGGGGAGCGG 
GAGATCCTCA ACTACGGCCA CACCCTGGGC CACGCGATCG AGCGCAACGA GCGCTACCTG 
TGGCGCCACG GCGCCGCGGT GAGCATCGGG ATGATGTTCG CGGCCGAGCT CTCGCACCTC 
GCGGGCAAGC TCTCCGAGGC GGAGGTGGAC CGCCATCGCG ACATCCTGGT CTCCCTCGGG 
CTGCCCACCA CCTATCGTGA CCGTCAGTGG CCGAAGCTCG AGGACGCCAT GAAGCGGGAC 
AAGAAGACCC GTGCGGGCCT GCTGCGCTTC GTGGTGCTCG ACCGCATCGG CGTGGTGTCC 
CGGGTCGAGG GCCCCGACCC GGCGCTGCTG CTGTCCGCCT ATGCCGCGAT CACCGAGGAG 
TGA
 
Protein sequence
MSTTVIPVST PTGGYDVHVG RSLLGELPAL LPEHARRVVI VHQPSLRDVA EQLRAAIAES 
DRQAFAAEIP DGEEAKTAQV AGFLWGVCGQ AEIGRKDLVI GLGGGAATDL AGFVAASWLR 
GVDVLQVPTT VAAMVDAAVG GKTGINTAEG KNLVGAFHPP IAVVADLDVL GALGANEVAA 
GLAEAVKAGF IEDTAILDIV ERDPAAVLDV TTDQFRVVIE RAIRVKARVV SADLRESGER 
EILNYGHTLG HAIERNERYL WRHGAAVSIG MMFAAELSHL AGKLSEAEVD RHRDILVSLG 
LPTTYRDRQW PKLEDAMKRD KKTRAGLLRF VVLDRIGVVS RVEGPDPALL LSAYAAITEE